| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3661 |
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| Symbol | |
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| ID | 5541163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4789613 |
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| End bp | 4790293 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895781 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001433728 |
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| Protein GI | 156743599 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.394742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.594777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATCC TGGTCGCCGA CGATGATCTG GCCAGTGTCA AACTGACGTC CTTTTTGCTC
GAGGATGCCG GATACCGAGT CATCAAAGCC TACGACGCGG CAGGCGTGTT GCATGCGATC
GAACAACGCA CCCCCGATCT GGTGTTGCTC GATGTCGGGA TGCCGAAGGT CAGCGGCTTC
GATATCTGCC GCCAGATCCG TCGTATGTCG GACGTGCCGA TTATTTTCGT CACCGGCAGC
GGTCAGTTGC AGGATCGCGT CACCGGGCTG CAAATTGGCG GTGATGATTA TCTGGTGAAA
CCCTTCGAAC CGGCCGAGTT GCTGGCGCGC GTCGAAGCAG TGCTGCGGCG GCGCAATAGC
GATATGGTCA ACCCGGTGAC GCGGATTTCA CAGGGACCGC TGACGCTCGA TCCGATCGAG
CATACGGTTC TGTTTGAAGA TGGCCGCCAC GTCGTGCTCA CTCCGATTGA ATTTCGCCTG
CTCTACTATC TGATGCAAAA CTCAGGGCGC GTCCTGAGTC CTGACCAGAT TCTCAACAAA
GTATGGGGAT ACGACTACGA AGGCGAAAGT AATCTGGTCG CCGTCTACGT GCGCCGGCTG
CGCGCGAAAA TCGAATCCGA TGGCGAATCG CCGCGCCATA TTATCACCGT GCGCAATCTA
GGCTACAAAT TCGTCGCCTG A
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| Protein sequence | MEILVADDDL ASVKLTSFLL EDAGYRVIKA YDAAGVLHAI EQRTPDLVLL DVGMPKVSGF
DICRQIRRMS DVPIIFVTGS GQLQDRVTGL QIGGDDYLVK PFEPAELLAR VEAVLRRRNS
DMVNPVTRIS QGPLTLDPIE HTVLFEDGRH VVLTPIEFRL LYYLMQNSGR VLSPDQILNK
VWGYDYEGES NLVAVYVRRL RAKIESDGES PRHIITVRNL GYKFVA
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