Gene Rcas_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3659 
Symbol 
ID5541161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4787064 
End bp4787882 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID640895779 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_001433726 
Protein GI156743597 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.834466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.597722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC TTCCAGAAGA CCTTGATCTG ATCACGCTCC GACGCCAGCT CGACACGCGC 
ATCATCGGCG CCATGCTGAT GCGCTATGAG CGAGTGGCGT CCACCAACGA CATCGCCAGA
GCGCGCGCGC GCAACGGCTA TCCCGAAGGA TTGGTCGTGC TGACGGAAGA ACAATCGGCG
GGGCGCGGTC GCCTCGGACG CACCTGGGTG TCAGCCTATG GCGATGCGTT GTTGCTGTCA
ATTCTGCTGC GCCCGGTCTG GCTTCCGCCA GGCGAGGCGT TCTCGCTCAC AATGATGGCC
GGCGTCGCCC TCTGCGAAGC AGTTGAACAT GTCGCTTCGG TGCGCGCCCA CCTGAAATGG
CCCAATGATC TGTTGCTGTT TGTCGATGGC AAATGGCGCA AAAGCGCAGG TATTCTGACT
GAGGTCAGCG TGAACGGCGA TACTCTTGAG TGGGCAGTGG TGGGAATGGG AGTAAACGTC
AATCAGGCGC CTGACAGTAC GATCAACGGG CGTAATCTGC AACAGACGGC GACATGCATC
AGCGCTGCGG CTGGTCAACG CATCTCGCGC ACCGCCCTGC TCGAAGCATT GCTGACAACG
CTCGATGAAC GCTACGCACA GATTCGGTCA GGTGAGCGCG CGGCGCTGTT CGCCGCCTGG
CGTGCGCGCC TGATGCACAT GGGTGAACCG GTGACCGTGA CGCTGCCCGG CGGCGAGTTG
CACGGCATTG CAGAGGATGT CGCCCCCGAC GGCACACTGT TGCTGCGCGA CGCCACCGGT
GTTCTGCACG CCGTACACAC CGGCGATGTA GGATTCTGA
 
Protein sequence
MSPLPEDLDL ITLRRQLDTR IIGAMLMRYE RVASTNDIAR ARARNGYPEG LVVLTEEQSA 
GRGRLGRTWV SAYGDALLLS ILLRPVWLPP GEAFSLTMMA GVALCEAVEH VASVRAHLKW
PNDLLLFVDG KWRKSAGILT EVSVNGDTLE WAVVGMGVNV NQAPDSTING RNLQQTATCI
SAAAGQRISR TALLEALLTT LDERYAQIRS GERAALFAAW RARLMHMGEP VTVTLPGGEL
HGIAEDVAPD GTLLLRDATG VLHAVHTGDV GF