| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3652 |
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| Symbol | |
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| ID | 5541154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4781793 |
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| End bp | 4782374 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895772 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001433719 |
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| Protein GI | 156743590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.172149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.558017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTCA CCATTCACAA AACGCCACTG CCCGGCGCCG TGATCATCGA ACCGGTCTGT
TTCCGCGATG AGCGCGGCTT TTTTCTGGAG TCGTGGAACT CCCGCGATTT CGCGGCGCGC
GGCATTGCAA TCGATTTCGT GCAGGACAAT CACTCGCGCT CGGTGAAGAA CGTGTTGCGC
GGCTTCCACT ACCAGGATAT GACGGCGCCA ATGGTGAAAC TGGTGCGCTG CACGCTGGGA
AACGTCCTTG ATGTGATCGT CGATTTGCGC GTGGGATCAC CCACCTTCGG GCGCTGGCAT
GCCGTGGAAT TGACAGCAGA CAACATGTTG CAACTGTTGG TTCCAATTGG GTTCGGGCAT
GCGTTTCTCA CGCTCTCCGA TGTGGCGGAG ATTCAGTACA AATGCAGCAT ATACTACACC
CCCGCCGCCG AAGGGGTCAT CGCCTGGAAC GATCCCGACA TTGGCGTCCC CTGGCCCGTG
ACCGATCCGA TCCTCTCGCA GCGCGACCGG AAAGGGATGC GGCTGGCAGA GTATCTTGAA
CGTCCGGCGT TCCGGTTCGG GAATGTGGAA GGTGCAGGTT GA
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| Protein sequence | MQFTIHKTPL PGAVIIEPVC FRDERGFFLE SWNSRDFAAR GIAIDFVQDN HSRSVKNVLR
GFHYQDMTAP MVKLVRCTLG NVLDVIVDLR VGSPTFGRWH AVELTADNML QLLVPIGFGH
AFLTLSDVAE IQYKCSIYYT PAAEGVIAWN DPDIGVPWPV TDPILSQRDR KGMRLAEYLE
RPAFRFGNVE GAG
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