| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3637 |
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| Symbol | |
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| ID | 5541139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4755711 |
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| End bp | 4757981 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895757 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001433704 |
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| Protein GI | 156743575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase
[COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.871876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00349398 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCTCC CTCCCTTTCC CCTTTCCCCT TCGCTTCCCG CCTACGGCTA TGCGCCGGTC
GATCCGGCGG CGACGCCGGT GGTGAGTATT GTCACGCCAT GTTACAACTC TGGCGCGATC
TTCCTCGATA CCGCGCGCTC GGTGCTGCGT CAGTCGTTGC AGCAGTGGGA ATGGATCATT
GTCAACGATG GGTCGGACGA TGCGGCCACG CTGCGCGTCC TGGCGTTGCT CCGCGCCGTG
AATGACCCGC GCATTCGCGT GGTGGACCGG TCCCGCTGCG GTCTTTCGGC GGCGCGCAAT
GCGGGTGTCG CCGTCAGTCG CGCACCGTTG CTCTTCTTCC TCGATAGTGA TGACCTGCTG
GCGCCGACGG CGCTCGAACA GTGCGCCTGG GCGCTGGCGT CGCGTCCGCA GAGCGCTGCC
GTGGCGACCC GGTGCGCGAC GTTCGGCGCG GCGCAGCAGG AGACGCGCCG CGGGTTTGCG
ACGCGCCATA TGTTTCCGCA CGATAATCCG CTGACAGTCA GTGTTCTGCT GCGCCGTTCG
GCGTTCGACC GCGTCGGCGG GTTCGATGAG CGTTTCCGCG ATGGGTTGGA GGATTATGAG
TTCTGGGTGC GCCTGGCAGC TGCCGGGTTG TGGGGACACG ATATTGCGGA GGCGCTGGTG
TGGCTGCGCC GCAAGGCGCC AGAGACGTAT CGCGGGTATC GCTGGACGTT TCGTGAGGAT
CGGGGGGCAA TGGCGCGTAT GCGCAATGAT CTGCGCACGC GCTATCCGCA GGTGTTCCGC
GATGGTCCGC CGCGCGTGTC TGGTGAGCCG TCCCCCATTC TGCAACCGCA CGCGCTGATC
GATCCTGAGC CGCCGTTCGC CAATCGTCTG CAACCGGTCG GAGCGCGGCG GGTGCTCATG
CTGGCGCCCT GGGTCGAGAT CGGCGGCGCG GATCGCTTTA CCATCGACCT GGCAGCCGGT
CTGCGCGCGC GTGGGTGTCG CGTGTCGGTG TGCCTGTCGC GTCCGTCGGC CAACCCCTGG
CTGAATGAGT TGCGCGGCGC TGCCGATGAG GTCTTTAATC TGCCGACGTT CCTTGCGCCT
GCCGATTATC CGCGCTTTCT GCGCTATCTG ATCGAGTCGC GCAGCATTAC GACGGTGGTG
GTGCAGAACG ATCTGTTTGC TTATCGGTTG CTGCCTTTCC TGCGCGCCTG GTGTCCTGAT
GTGCCGATTG TCGATTTTTT GCACATCGAA CAGGAGCACT ACCACGGCGG CGTGCCGCGC
GCAGCGCTGG AGTATGATCC GGTCATCGAT CTTCATATCA CATCATCGCA CCACCTGCGG
CAGTGGATGA TCGAGCGCAG CGCCGATCCG GTGCGGGTTG ATGTTTGTTA TATCAATGTG
GATACACAGC GCTGGCAACC CGATCCGGCG GCGCGCGCGC GCGTTCGCGC GGAACTGGGA
GCGCCCCCTG ATGTGCCGGT GATCCTGTTT GTCGGACGGT TGGCGCCTCA GAAGCGTCCC
CGACTGGTGG CAGAGATCGC GCGCGCGCTG ATGGAACAAG ATGTTCCCGG CATGTTTCTG
GTGATCGGCG ATGGTCCCGA CATGGGCTGG ATGCGGCGGT TTGTGCAGCG GCATCGTCTG
GAACGCCGGG TGCGGTTGTT GGGGTCGGCG CCATCGGCGC AGGTGCGGGA GATAATGGCA
GCCGCCGATA TTCTACTCTT GCCGTCGGAA CACGAAGGCA TTGCGTTTGT GCTCTTCGAG
GCGATGGCGA TGGGGCTGGC GCCGGTTGCC GCCGATGTCG GCGGGCAGCG TGAGTTGGTG
ACGCCCGACT GCGGTGTGCT CGTTCCGCTG GCGGGAGATC AGGTTGCGCA GTATGTCGAA
GCGCTGCAAC GCCTGATCGC CGATCCGCAG CGGCGCGCGG CGATGGGGCA GTCGGCGCGC
GCGCGGGTTG TGGCGCATTT TGACCAGCAG CAGATGATCG ACCGCATGCT GGAACTCTTC
GAGCAGGCGG CGACCCTGGC GCGCGATGCG CCGCGCCCGT CGGTGGATCG CGGTCTTGGT
CTGGCGACGG CGTCCCTGGC GATTGAGTAT TTTCAGTTCC GCGAGGCGCT GCTCCGGCTG
GCGCCGGTGC GTTGGGCGCG CGCGGCGCGC TGGTCCTCTG CTTGGGAAAC GGTGCGGCGG
ATTGCAGAGG TGCGCACCCT GCTCGACCGC CTTGATCGCC GGATATATGT GCTGCGTCGT
GAGGTCATGT GGCGAATCAA GCGCGCGCTG GGGAAGGAGT ATAATCAGTG A
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| Protein sequence | MPLPPFPLSP SLPAYGYAPV DPAATPVVSI VTPCYNSGAI FLDTARSVLR QSLQQWEWII
VNDGSDDAAT LRVLALLRAV NDPRIRVVDR SRCGLSAARN AGVAVSRAPL LFFLDSDDLL
APTALEQCAW ALASRPQSAA VATRCATFGA AQQETRRGFA TRHMFPHDNP LTVSVLLRRS
AFDRVGGFDE RFRDGLEDYE FWVRLAAAGL WGHDIAEALV WLRRKAPETY RGYRWTFRED
RGAMARMRND LRTRYPQVFR DGPPRVSGEP SPILQPHALI DPEPPFANRL QPVGARRVLM
LAPWVEIGGA DRFTIDLAAG LRARGCRVSV CLSRPSANPW LNELRGAADE VFNLPTFLAP
ADYPRFLRYL IESRSITTVV VQNDLFAYRL LPFLRAWCPD VPIVDFLHIE QEHYHGGVPR
AALEYDPVID LHITSSHHLR QWMIERSADP VRVDVCYINV DTQRWQPDPA ARARVRAELG
APPDVPVILF VGRLAPQKRP RLVAEIARAL MEQDVPGMFL VIGDGPDMGW MRRFVQRHRL
ERRVRLLGSA PSAQVREIMA AADILLLPSE HEGIAFVLFE AMAMGLAPVA ADVGGQRELV
TPDCGVLVPL AGDQVAQYVE ALQRLIADPQ RRAAMGQSAR ARVVAHFDQQ QMIDRMLELF
EQAATLARDA PRPSVDRGLG LATASLAIEY FQFREALLRL APVRWARAAR WSSAWETVRR
IAEVRTLLDR LDRRIYVLRR EVMWRIKRAL GKEYNQ
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