Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3625 |
Symbol | |
ID | 5541127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4734734 |
End bp | 4735168 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640895745 |
Product | hypothetical protein |
Protein accession | YP_001433692 |
Protein GI | 156743563 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.825866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGCAT GGTCGGAACT GGACGCAGTG TACCCGCCCG GCGCACTGAC GCCTGGCGCG ACACTACTGG CGGCGCTGGC GCACCTGCAC AGCGCGAGGA GCCTGTATGA TGAGCGTGGC GCGCTGGCGC GCTTTGTGCC GGATGCGCGG CGCGGCCTGG CGCTGGACCG CGATCTGATC GACCGGATCG AGCAGCATCT GGCGCGTGTT TCGTTCGATG CGTTCGTCCG TGAAGCGCGC GAACGGCTCA ATTATCAGCA ACGACGTTGC CTGGCGCTCA ACCTGCTCGA TGCCGTGCTC GCCGCCGGTG AACGCCCCGA AGCGCATCCG CGCTACCGCG CGCTGATCGA AGGACTCGGC ATCACGGCTG AAATGCTCGA CCCCTACCAG CACGCCCTTG TGTTGAAGAA CGACCTGAGC ATCTTTCCAC AGTAA
|
Protein sequence | MGAWSELDAV YPPGALTPGA TLLAALAHLH SARSLYDERG ALARFVPDAR RGLALDRDLI DRIEQHLARV SFDAFVREAR ERLNYQQRRC LALNLLDAVL AAGERPEAHP RYRALIEGLG ITAEMLDPYQ HALVLKNDLS IFPQ
|
| |