Gene Rcas_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3625 
Symbol 
ID5541127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4734734 
End bp4735168 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID640895745 
Producthypothetical protein 
Protein accessionYP_001433692 
Protein GI156743563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.825866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCAT GGTCGGAACT GGACGCAGTG TACCCGCCCG GCGCACTGAC GCCTGGCGCG 
ACACTACTGG CGGCGCTGGC GCACCTGCAC AGCGCGAGGA GCCTGTATGA TGAGCGTGGC
GCGCTGGCGC GCTTTGTGCC GGATGCGCGG CGCGGCCTGG CGCTGGACCG CGATCTGATC
GACCGGATCG AGCAGCATCT GGCGCGTGTT TCGTTCGATG CGTTCGTCCG TGAAGCGCGC
GAACGGCTCA ATTATCAGCA ACGACGTTGC CTGGCGCTCA ACCTGCTCGA TGCCGTGCTC
GCCGCCGGTG AACGCCCCGA AGCGCATCCG CGCTACCGCG CGCTGATCGA AGGACTCGGC
ATCACGGCTG AAATGCTCGA CCCCTACCAG CACGCCCTTG TGTTGAAGAA CGACCTGAGC
ATCTTTCCAC AGTAA
 
Protein sequence
MGAWSELDAV YPPGALTPGA TLLAALAHLH SARSLYDERG ALARFVPDAR RGLALDRDLI 
DRIEQHLARV SFDAFVREAR ERLNYQQRRC LALNLLDAVL AAGERPEAHP RYRALIEGLG
ITAEMLDPYQ HALVLKNDLS IFPQ