| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3610 |
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| Symbol | |
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| ID | 5541111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4715366 |
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| End bp | 4718617 |
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| Gene Length | 3252 bp |
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| Protein Length | 1083 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895729 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001433677 |
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| Protein GI | 156743548 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1716] FOG: FHA domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.133467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATG CTTCCGACTC GCAGCCGTTG CCCATATGCC CATTCTGTGG CGCCCCACAT
CGTCCTGGAA TACATGTTTG CCCGCAGTGT GGTCGTCCAT TGCATCCATC ATCGCATATC
TTCGAACTCC TGGTCATCCG GGAGAATACC ATCACGGCGC ACATTCCTCT GCCCACAGCC
GTGATCGCCA TCGGTCGAGC AACCGATAAC ACGATCCTTC TTGACGATCC AAAGATCTCG
CGTCACCATC TTCGCCTGAC ATGGAACGGC GCTGCATTCG TTGCCGAAGA TGTTGGGAGC
AGCGGCGGAA CGTTACTGAA CGGCGTCTCG CTGCGCGCGC CGACTGCCCT GCGTCCGGGG
GACACGCTGA CGCTGGGAGA CACGATGCTG CGTCTGGGCA TTGTGTCGGA AGTGGAAGCC
GTCCTCGCTC CGCCAGTGCT GCCTGCCGCT CCGCTACCGC CGTCCCTGGC TGCGCCCTCA
GCCCATGCAT CCGGTCCAAT GTCAGCGCCG CCATACCCTC CACCATCCGC ATGGCCGTAT
TCGTCTGCGA CTGGGCAGGA ACCATCCGCC TTTGCGCAAT CGTATTCGCC TCATGCACCG
CCTCCTCCCG GTATGGCGCC TTACCCACTG CCGCCTTCTG GCGTCTCCCA GATGCCTACG
CCGCTGTCCC GCCACTCACT GTCGCCTGGA CTGCTCGCAA TCGCCGCGAT TGCGGTCGTC
TTCGTCGTCG TTGGAGGGAT TGCTGCGGCG TTGCTCTTCG GTTTCGGGCG CAGTGCAATC
AGCAGCGCGC CGCCAGCCAA TAGTACGCCT CTTCCGCCGG CAAATCTCGG TCCGACGACC
CCGACCGCGA CGCCTGCTCC ACTGACCATG ACGATCGCGC CCATCGAGCA GACAACCGTC
GCTGCTGATG GACAACCGCA CATTGATAGT CATGGCGCCA GTCTCACCGT TCCAGGTGAT
GCGCTTGAGG AGGGATCAGG GATCGAATTA ATGGCGAGCG CCGCGCAGGG ATCGCTCGCA
GATGCGCTCA ATCAGGCGTT TGCCATCGAA ACGCCGTTCT ATTCGGTTGT GGCAGAACAC
GACGGGCGTG GACGCGCAAC GCTGGCGCTC CCGGCAGCCG GACCGGACTC GCGTGTAGCA
GTGGTCATCG ATAACGAATA TCTGGCGCTC CTTGATCTCC AACCAACCGA TGGCATGCTG
CGCATCGACA CGTTGATTGC GCCCAAGACG CTGCCCGACG CGCCTGCGCC GGGAATAGCG
CGCGATGGGA CGATCCACTA TGTCGTTCTG CGTCCCAAAC CCGGCAGCGC CGCATCTCCA
GCCGAAACGC ACAACCTGCT GGGGCTGAAC CTTGCGCCGC GCCGCGCCTA TGCCGCCGAT
GTCTATCGTG AATGCCTGGA ATGGACGACA AACACTCGTT GTCGGACGAA CGGCAGAGTC
CATGTCATGT GGCGACTGAC CGTGCCACTA CAAACCGCCG ATGCCGACGC CATCATTTCT
CAGGTGGATG TCCTGATGAA AGCGTATGCA GGGAGAGGGT TCACCGCTGC TGCGTCAAGC
GCGTCGATCT TTGTGATTGT CGATCCATCA GTTGCCGGAC CGGTGTATAG CGCCAAGAAT
GGGATTATAT ATCTCCCGAT GGATAGCGCA TCCAGCATAT CCACCAATGA AGGACGACGT
GATCTGGCGC ACGAACTTTT TCACTGGATC CAGGACGAGG AGTACGTTAT GACGCTATCG
GCGCTCTCTG GCGCCAGAAC ATGGTGGCTG GAAACGACTG CGGAAAATGG CGTGTTTTTG
ATCGATGATA GCGCTCTGGA GTTCAACCTA CAGCACTATG GTCAGACAAC GGTTGATCGA
CCGGCATTCC TTGGTTTTCA GGCGGCGCCG TTCACATGGT CGCGCAGCGA CGAGGCGCGG
TACATCCACG CGCAATTGCT CAGGGTAAAC ATGTGCGACA GCGATGCCTG CGCAATAAGC
GAACAGGGAA TGATTCGGGC AATCAACGAC GGAACATACC CGCTCAATGA CGCCGCCTTC
CAGGCGAACA TCCGCGCCAA TCTGGACGAT TACGCGCGCT ATCTGCTCGG CGTAGCGCCT
GAACGGACGA ATACGACTAT CTCGCTCCAC AACGTCGTCC GTACCGGTGA TACGTTTGGT
GATGTCATCT GGGTCAAACA AAATATCCTG AGCGCTGCAC AAGAGTTCTT CCTGGAAAGC
AGTTCGGGTG AACCGCAGAT CAGGCAGGAG ACCCCCAAAG ATCGCCCGCC CGAATACATC
ATCAACGCGC CCATCGAGCG GGCAGGAGTC TATCCGTTAC AGGTCGTCAG CGGCGGAACA
GGCAGACCAA CCTGGCCTGT CATGCTGATC ATCGAACCAG GGATCGAACT CTTGTATCGC
CTGGATGATG AACCTGTCGT TCATCATCCA GGCGATGCGC AGCTGGTGCT GGGTCCGATC
CATGCGACAA TGGGCTATCG AAAGGTGCGG GTGGTTGCGC TTGGGCGTGA TGAGACGAAC
ACCTTCAAAG CCGCCGTGCG CCTTGTCGAT CTGCAAGGAG ACTGGTTGCT GATACCGGGT
GATGTGCGCA GCAATTCGGT TGTGTGCAGC AGTGACAACA CATCCGTCGA TCCCGCGAAA
CTGACTCAAC TATCCGCCGC CCTCTCAGAG GGGATGGCGC AACGAGGATC ATACACCTGG
CAAGGTCTCA ACGAACTGGC GTTTGCGCTC GATCCCGGCA TGACCCTGAC CGACGATCCG
GATGATCACT CGCAGATCGA AGCGATTGGA TTGATTGGAC CCGATAATAT TCAGGGGATG
CTGCGTCTGG TTGTTCCGCC GCCAGAAACG GGCGGCATGC AACCAGGAGT TCTTCTGCTG
GTTGCGATGC CTTCCGGTAT TCTGGCGTGG CGCACACGCC GCCGTGTCTT GATGGCGCTG
ACGATTCTGA TCCTGGGCGC TTTCCTCGCC GGATGCGTCG GCGTATCGGT TCATGGCAGC
GTCGACACAC GCTACATCCT TGGCAAACTG GAATATGTCG GCAAGGGCGA CACCCTCGGC
GAACCGCTCT GGCGCATCAG CAAGGGTGCA GCAACGACCG ATGTAGATCT GACGATCACC
GTAGCAACGC AGATGATCGG AGATGAGCAA CCACAGGAAC AAACAACCCA GTGCAAGGGT
CGGGTAGTAC ACGACATCAC CGTCGAGATC TATAAAGATG GCGTTATCTC GCTACAAGAT
GACGGCGAGT AA
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| Protein sequence | MRHASDSQPL PICPFCGAPH RPGIHVCPQC GRPLHPSSHI FELLVIRENT ITAHIPLPTA
VIAIGRATDN TILLDDPKIS RHHLRLTWNG AAFVAEDVGS SGGTLLNGVS LRAPTALRPG
DTLTLGDTML RLGIVSEVEA VLAPPVLPAA PLPPSLAAPS AHASGPMSAP PYPPPSAWPY
SSATGQEPSA FAQSYSPHAP PPPGMAPYPL PPSGVSQMPT PLSRHSLSPG LLAIAAIAVV
FVVVGGIAAA LLFGFGRSAI SSAPPANSTP LPPANLGPTT PTATPAPLTM TIAPIEQTTV
AADGQPHIDS HGASLTVPGD ALEEGSGIEL MASAAQGSLA DALNQAFAIE TPFYSVVAEH
DGRGRATLAL PAAGPDSRVA VVIDNEYLAL LDLQPTDGML RIDTLIAPKT LPDAPAPGIA
RDGTIHYVVL RPKPGSAASP AETHNLLGLN LAPRRAYAAD VYRECLEWTT NTRCRTNGRV
HVMWRLTVPL QTADADAIIS QVDVLMKAYA GRGFTAAASS ASIFVIVDPS VAGPVYSAKN
GIIYLPMDSA SSISTNEGRR DLAHELFHWI QDEEYVMTLS ALSGARTWWL ETTAENGVFL
IDDSALEFNL QHYGQTTVDR PAFLGFQAAP FTWSRSDEAR YIHAQLLRVN MCDSDACAIS
EQGMIRAIND GTYPLNDAAF QANIRANLDD YARYLLGVAP ERTNTTISLH NVVRTGDTFG
DVIWVKQNIL SAAQEFFLES SSGEPQIRQE TPKDRPPEYI INAPIERAGV YPLQVVSGGT
GRPTWPVMLI IEPGIELLYR LDDEPVVHHP GDAQLVLGPI HATMGYRKVR VVALGRDETN
TFKAAVRLVD LQGDWLLIPG DVRSNSVVCS SDNTSVDPAK LTQLSAALSE GMAQRGSYTW
QGLNELAFAL DPGMTLTDDP DDHSQIEAIG LIGPDNIQGM LRLVVPPPET GGMQPGVLLL
VAMPSGILAW RTRRRVLMAL TILILGAFLA GCVGVSVHGS VDTRYILGKL EYVGKGDTLG
EPLWRISKGA ATTDVDLTIT VATQMIGDEQ PQEQTTQCKG RVVHDITVEI YKDGVISLQD
DGE
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