| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3609 |
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| Symbol | |
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| ID | 5541110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4712322 |
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| End bp | 4715033 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895728 |
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| Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
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| Protein accession | YP_001433676 |
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| Protein GI | 156743547 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACAGC CTGCAACCTG CATTCACTGC GGCGCACCGC TGAACCGACC CGGGGCGAAG
TTCTGCACCC GCTGCGGGAA ATCACAAGAT ACACCTCTAC CCGCTGCCCT TGCATCAACC
GCTCGTTCTT CCGCCGCTCC TGGCTACACT CCTGAGCGAA CCGCTTCCCT GGCGCAGGGA
GCATTCGCTG CCCCGCCTGG CGGCGCTCCT GACGCGACCA TGATCGGCAG TGGTTCATCA
CAGGGTGGGG TGTCCGCCAC CGGACCCGTG CTGATCGTTC AAGATGTAGG TCACACCTTC
GAGGTCACGC TCGGTCAACA ATCGCTTTCG ATTGGGCGCG CGCCCGACAA CGATATTGTC
ATCACCTCAC GCTTCGTCTC CGGTCGCCAT GCGCGCATCG AGCCGCATGG CGTCGCGCAC
CAGATTGTCG ATATCGGCAG CACCAACGGT CTGCTCTTTA AGGGAAAGCG ACTTCCTGCC
AATGCGCCGC ATGTGCTGGC AGACAGCGAC GTGTTGCGCA TTGGCGACCC GGCAACCGGT
AATTTCGTCA CGCTGACCTA CCGCAACCCA CAGGCGCCGA AGGTTCAACA GGCGGCTGAG
GTCACGCGCA GCTATCGGCT CGATCCGACC GATCCGCAGA TTACAATTGG ACGTGAGGGA
TGTGAGATTC TCCTCGATAA CCCGCAGGTG TCGCGCAGAC ACGCGGTTAT CGACCGGGTG
AACGGGAAGC ATGTGCTGCG CGATGTGGGA AGCACCAATG GCACCTTTGT CAATGGGCGG
CGCATCACCG AGCATACACT GGCAAAAGGC GACATTATCC AGATCGGCGC ATTCAAGCTG
GTCTACACTG GCGAAAGCCT CGATCAGTAC GACCAGCGCG GCGCGTTGCG CATCGATGCG
CGCAACCTGT GGCGTGAGGT ATCGCGTGGC GGCAAAACCC GCATGATTCT GAAAGATGTC
TCACTTTCGA TTGCGCCACG CGAGTTCGTG GCGCTCGTTG GCGGCAGCGG CACCGGCAAG
AGCACCCTCC TCAACGCCCT CTCCGGCTTC GTGCAGGCGA CCCATGGGAG CATCCTGGTC
AACGGCGACG ACTACTATCG TAACTTCGAC GCCTACCGCT CGGTGTTGGG CTATGTTCCA
CAGGACGACA TCCTTCATCG CAGCCTGCCG GTCGAACGCG CGCTGGGATA CGCCGCCGAA
CTGCGTCTGC CTGCCGATAC GGCGCCGGTA GAGATTCGGC AGCGCATCGA CCGTGTGCTC
GAAGATGTCG AGATGACGCC GCACCGCGAA AAACCGATTG AAAACCTGTC CGGCGGGCAG
CGCAAACGTG TTAGTATCGG CGCTGAACTG CTGGCGGATC CGTCGCTTTT CTTTTTGGAC
GAACCGACCT CCGGACTCGA TCCCGGTCTC GAAAAGAAGA TGATGTACAC CCTGCGCCGC
CTGGCGGATA GCGGGCGCAC CATTGTGCTG GTGACGCATG CCACCGCCAA CATTAATGTC
TGCGATCACG TGGCGTTCAT GTCGGACGGA CGGATGGTCT TCTTTGGTCC GCCATCCGAG
GCGCTCAATT TCTTTGGCGT GTCGAGCGGT GATTTTGCCG ACATTTACAC CCGCATCGAC
GGACTGGCAG ACCCGAACGA TCCTGAACGG TGGGCGATTG TGCAACGCGA TCTTCAGACG
GAGTACGCGG CATGGCAGCA TCATAGGCAA CAATCGTCGG GAAACAACAA ACCGTCGGTT
CCTACGCTTG CCGAACTATG GGAGATGAAG TTCCGCGCCT CGCCACAATA TGCCACGTAT
GTGACCGGGC GATTGGCAGA GGCGCCGGTC GGACCGGTGA CCGGCAACGC TGAGGGGGAC
GGCGCAGCGA AGCGTCCCGG CGTTTCGTCA TTGCGACAAT TCGGCATCCT GGTGCGCCGG
TATTTTGACC TGACGCTGCA AGACCGGCGC AATCTGGCAA TCCTGCTCCT CCAAGCGCCG
ATCATCGGTT TGCTATTGAT GCTGGTCGCC AAAGCCGATG CGATTGTCGG CGAGAACGCT
TTTGCCAATG AAGCCAAGAA GGTGCTCTTT ATGCTGGCGA CGGTCGGCGT CTGGTTTGGC
ATTATCAACG CTGCGCGCGA GATTACTAAA GAAGCGCCGA TCTACCGCCG GGAGCGCCTT
GCGAATCTGC GCATTGCGCC GTATGTGCTG TCGAAAGTGC TGGTGCTGCT GCTGCTGGTC
GTTCTGCAAA GCGCCGTGCT GCTGGCGTTG GTCGGGCTGA GAGTGCAGTT CCCTGCGCAG
GGAGTGATGT TGCCGATACA ACTGGAACTG TTCATCACTG CCGTGCTGAC GTCGTTGGCA
GGGCTGGCGA TGGGGTTGGC AATCTCGGCA TTCGCGGCAA CGCCGGATCG GGCGATTTCG
CTGGTGCCGC TGGCGCTTAT TCCGCAGATT ATTTTCGCGG GGGTCATTTT CAGCCTGGGG
GATGGCATCA CCGTGCAGCG CGTTCTCTCC TGGCTGACGA TTAGCCGGTG GGCGATGGAT
GCCTATGGTA CATCGGTCAA TATCAATGAT CTTCCACTAC AACCGGGAAT GTTGCGCCTG
CCCAATCCGC CGGAGGAGTA CACTTTCGCG CCGGAGCACT TGCTGTCACG CTGGGGGATA
CTCTTTGGTT ACATGGTCGT CTGCCTGGCG CTGACCGCCT GGCAACTGTA TCAGCGTGAC
CGTCAGAGGT AG
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| Protein sequence | MSQPATCIHC GAPLNRPGAK FCTRCGKSQD TPLPAALAST ARSSAAPGYT PERTASLAQG
AFAAPPGGAP DATMIGSGSS QGGVSATGPV LIVQDVGHTF EVTLGQQSLS IGRAPDNDIV
ITSRFVSGRH ARIEPHGVAH QIVDIGSTNG LLFKGKRLPA NAPHVLADSD VLRIGDPATG
NFVTLTYRNP QAPKVQQAAE VTRSYRLDPT DPQITIGREG CEILLDNPQV SRRHAVIDRV
NGKHVLRDVG STNGTFVNGR RITEHTLAKG DIIQIGAFKL VYTGESLDQY DQRGALRIDA
RNLWREVSRG GKTRMILKDV SLSIAPREFV ALVGGSGTGK STLLNALSGF VQATHGSILV
NGDDYYRNFD AYRSVLGYVP QDDILHRSLP VERALGYAAE LRLPADTAPV EIRQRIDRVL
EDVEMTPHRE KPIENLSGGQ RKRVSIGAEL LADPSLFFLD EPTSGLDPGL EKKMMYTLRR
LADSGRTIVL VTHATANINV CDHVAFMSDG RMVFFGPPSE ALNFFGVSSG DFADIYTRID
GLADPNDPER WAIVQRDLQT EYAAWQHHRQ QSSGNNKPSV PTLAELWEMK FRASPQYATY
VTGRLAEAPV GPVTGNAEGD GAAKRPGVSS LRQFGILVRR YFDLTLQDRR NLAILLLQAP
IIGLLLMLVA KADAIVGENA FANEAKKVLF MLATVGVWFG IINAAREITK EAPIYRRERL
ANLRIAPYVL SKVLVLLLLV VLQSAVLLAL VGLRVQFPAQ GVMLPIQLEL FITAVLTSLA
GLAMGLAISA FAATPDRAIS LVPLALIPQI IFAGVIFSLG DGITVQRVLS WLTISRWAMD
AYGTSVNIND LPLQPGMLRL PNPPEEYTFA PEHLLSRWGI LFGYMVVCLA LTAWQLYQRD
RQR
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