| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3608 |
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| Symbol | |
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| ID | 5541109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4708554 |
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| End bp | 4709420 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895727 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001433675 |
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| Protein GI | 156743546 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.99318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTGG TAACGTACCG CGACAGCGAG GGAGTGCACC TGGGTGCGCT GCGCGGCGGC
GAGGTCGTGT CGCTTGTCGG CGTGGCGCCT GATATGTTGA GCCTGATCGA TGCCGGTCCC
GCCGGGTTGG AGGCTGCGCG CGCCGCTGCC GAACGCGAGA AGGGCGTTCC GTTGAGCGCC
GTGACACTTC TCGCGCCCAT TCCGCGCCCA CGACAGAATG TCATCTGTCT GGGGATGAAT
TATGTTGCGC ACGCCATCGA GTCGTACCGC GCGCGCGGGC GCGAACCCAA ACTGCCGGAA
TATCCGGTCT TCTTCACCAA AGCGGCGCAT ACCGTGTGCG GACCGGACGA CGATATTCCG
CTCGATCCCA AAGTGACGAC TGAACTGGAC TACGAGGTTG AACTGGCGTT TGTCATCGGC
AAGGCGGGTA TGAATATTCC GCGTTCAGAG GCGATGGCGT ATATCTTTGG GTATACCATT
GTCAACGATA TTTCGGCGCG CGATCTGCAA AGCCGTCATC AACAGTTCTT CAAGGGCAAG
AGTCTCTATC GCGCCTGCCC GATGGGACCG TGTATCGTGA CGGTGGATGA GATTCCCGAT
CCGGCGGGGC TTGGCATTCG TCTGCGGCTG AACGGCGAGA CGCGCCAGGA CTCGCATACG
GGAGACCTGA TCTTCGACAT CCCTGCGATT ATCGAACACC TGTCACTCGG TATGCCGCTG
GAAGCAGGGA TGGTCGTTGC AACCGGCACG CCGGCCGGGG TTGGTCTCGG ACGCACGCCG
CCGGAGTACA TGCGCCCTGG AGATGTGATG GAAGCCGAGA TCGACTCAAT CGGCGTGCTG
CGCAATCGGA TTGTCGCAGC AACGTGA
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| Protein sequence | MRLVTYRDSE GVHLGALRGG EVVSLVGVAP DMLSLIDAGP AGLEAARAAA EREKGVPLSA
VTLLAPIPRP RQNVICLGMN YVAHAIESYR ARGREPKLPE YPVFFTKAAH TVCGPDDDIP
LDPKVTTELD YEVELAFVIG KAGMNIPRSE AMAYIFGYTI VNDISARDLQ SRHQQFFKGK
SLYRACPMGP CIVTVDEIPD PAGLGIRLRL NGETRQDSHT GDLIFDIPAI IEHLSLGMPL
EAGMVVATGT PAGVGLGRTP PEYMRPGDVM EAEIDSIGVL RNRIVAAT
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