| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3600 |
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| Symbol | |
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| ID | 5541101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4698272 |
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| End bp | 4699918 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895719 |
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| Product | histidine kinase |
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| Protein accession | YP_001433667 |
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| Protein GI | 156743538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.94225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATA TGTCGCCACT TGTGGACTCT GCCTGCCTGA TCGACATGCT CAGTCGCGAA
CATCGTTGTG CATACCTGGT GGTTGATCGT TCCTTTCGCA CCCGATCAAT CGGTGGATAC
CTGCACCTGT TTGCCGATCA ACAACCGCAT ATCGGCGACT CGCTCTTCGA TGCGTTTCCC
GAACTGATCG GCAACGAAGC TATTCTGAAC GCCATTCTTG CAGGCAATGT CAGTCGCCTG
CATCTGCCAC ATGTGAACCG TGATGGCGCA CATGGTGAGG TGCGTTACCT GGACTTGCTG
ACACTGCCGC ATATCAATGC GCATGGTCAG ATCGATGGAC TGGTGCAGAC CATCACCGAC
ATCACCGATC AGAGTGTGAT CCAACAGGCG CATATTCAGC AGCGCAATGA ACTAAGCCTG
CTGAAGGATC GGTTGAGCCG GCAAAATGTC GAATTGGCGC GCACCAACGC CGAACTTCGG
CGCGCCAACC GCTTGAAGGA CGAGTTTCTG GCAGGGATCA GTCACGAAGT GCGCACGCCG
CTCTCTGCTA TTCTCGGTCT GGCGGAACTC CTGCGCGCGA AAATCGTTGG TCCGCTCAAT
GATGAGCAGG TAGAGATGTT GAGCCGCATC GAAGCGAGTG GTCGTCACCT GCTGGCGGTC
ATTAACGATC TCCTCGATCT GGCGAAGATC GAAGCAGGGC GCTTTGAACT GGAGCCACGC
CTGGTAGCGG CGCATCAGGT CTGCCGGTCG AGCCTGCTCA TGGTCAAAGA ACTGGCGCTG
CGCAAACATC AGCGAGTGCA TATCAACCTT GATCCAAAGG TCGAAGTGCT GCACGCCGAT
GAACGTCGGT TGCGCCAGGC GCTGATCAAT CTACTGTCGA ACGCCGTCAA GTTCACGCCG
CCAGGCGGCG ACGTTGGACT CGACCTGGAA GGCGATCCTG AGCAGGAGAT CGTGCGGATA
ACGGTATGGG ACACCGGTAT CGGCATTGCT GCCGAAGATA TACCACGCCT GTTTCAGCCT
TTCTCCCAGA TTCAGAATAA GTATCAGCAC GACCAGGCAG GCAGCGGGTT GGGTCTGGTG
ATGGTTGCGC GTCTGGCGGA ACTCCACGGC GGCGGGGTGT CGCTGGTGAG CGAACCGGGC
AAAGGTAGCC GCTTTACGAT GACGTTACCG TGGACCCGTG AGTATCAACA GGGGGCGCAG
ATGTTGACGG CGTCGGACGT GGATACCGCT TTCCCGGCAC GCACCATTCC AGAGGCGGAC
GATCTGCCGC TTACGGGAGA TCATCAGCAC ATCCTGCTGG TTGACGACGA TACGACCGGT
AGCGCCATCG TCGGCAATTA TCTTCAGCAA TGCGGCTATC GGGTCACGCA TGCGGTTTCC
GGCGATGAAG CGCTGGCGCT GGTACGTCAT GAATTGCCAG ACCTGGCGAT TATCGATCTG
CGGCTGCGGG GATTGGATGG GTTGGAGGTG GTGCGCTGGC TGCGCCAGAA CATCGCTACC
GGCAACCTCC CGATCATCGT GCTGACGGCG CTGGCGATGC CGGGGGACCG CGAACGCAGC
CTGGAGGCTG GCGCCAATGC GTACCTCAGC AAACCGGTGC GCCTGCGTCA CCTGGTGAAG
GAGATTGCAA GTCTGATTAA GGGTTGA
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| Protein sequence | MEDMSPLVDS ACLIDMLSRE HRCAYLVVDR SFRTRSIGGY LHLFADQQPH IGDSLFDAFP
ELIGNEAILN AILAGNVSRL HLPHVNRDGA HGEVRYLDLL TLPHINAHGQ IDGLVQTITD
ITDQSVIQQA HIQQRNELSL LKDRLSRQNV ELARTNAELR RANRLKDEFL AGISHEVRTP
LSAILGLAEL LRAKIVGPLN DEQVEMLSRI EASGRHLLAV INDLLDLAKI EAGRFELEPR
LVAAHQVCRS SLLMVKELAL RKHQRVHINL DPKVEVLHAD ERRLRQALIN LLSNAVKFTP
PGGDVGLDLE GDPEQEIVRI TVWDTGIGIA AEDIPRLFQP FSQIQNKYQH DQAGSGLGLV
MVARLAELHG GGVSLVSEPG KGSRFTMTLP WTREYQQGAQ MLTASDVDTA FPARTIPEAD
DLPLTGDHQH ILLVDDDTTG SAIVGNYLQQ CGYRVTHAVS GDEALALVRH ELPDLAIIDL
RLRGLDGLEV VRWLRQNIAT GNLPIIVLTA LAMPGDRERS LEAGANAYLS KPVRLRHLVK
EIASLIKG
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