Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3598 |
Symbol | |
ID | 5541099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4696548 |
End bp | 4697864 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895717 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001433665 |
Protein GI | 156743536 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.293022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCA GGCTCACCTT TGATGCGATT GTCGTTGGCG CCGGTCCGGC GGGCGTGGCA GCGGCGCTGA CCATGGCGCG TGGCGGGTTG AATGTCATCA TCATCGAGCG GGGACGTTTC GCCGGCGCCA AGAACCTCTT TGGCGGGGTC TTCTACACCC ACGCGCTGGC AGATGTCCTG CCCGATTACT GGGAACGTAA GCCGCCGTTC GAACGCCCGG TTACCGAGCA GGGGTACTGG ATGCTCTCAC CGGATAGCGC CATCCGTGTC ATGCACAAAA GTGAAAGATA CCTCAAAGAA CCGGCGGATG CATACACCGT CCTGCGAGCG CGCTTTGATC CCTGGTTCGC CGAGCAGGCG GCTGCGGCCG GCGCGTTGCT CATCACCCGC ACAACCGTCA CGCAGTTGCT CAAGGACGAA CGCGGGCGCG TCATCGGCGT CGATACCGAT CGTCCCGAAG GCAAAGTCTA CGCACCGGTC GTCATCATCG CCGAGGGGGT CAACAACCTG CTCACGCAAC AGGCGGGATT GATTGCGTCG GACCTTCCGC CGAAGTATGT GGCGCTGGCG GTCAAGGAAT ACATCAACCT GCCGGCAAAG GATTTGCAAA TACGCTTTGG CTTGAGCGGT CCGCGCGAAG GCGTTGCCAT CGATGTGTTT GGCGATGTTA CGCTTGGATT GCCGGGCACC GGCTTCATCT ATACCGATCA ATCCGGTATT TCGATTGGCG TCGGCATGCT GCTCGACGAA TTCGTCACCC ACCGTTTACG TCCCTACGAA GTGCTGGAGC GTTTCAAGCA CCATCCGGTC GTGCGTCCCT ATCTGGAAGG CGGCGAGGTG CGCGAATATG GTGCGCACCT GATCCCGGAG ATGGGGTACG ACCGTATGCC GAAACTGGCA GGCGATGGGG TGATGGTCGC GGGCGATGCC GCCGGGATGG TGGACGCGCT TCACCGCGAA GGAACGAACC TGGCGATTAC GGCAGGCAAG ATGGCGGGCG AGACGGCGCT GGCGGCGCAC CAGGCGGGCG ATTTCTCGGC GGCGTTCCTG AGCCGCTATC GCCGGAACCT GGAAGGAACC TTCGTGTTGC AAGACATGAA ACAGTACCGG CGTATGACCG ATTTTCTCGA GAGTTCGCCG CAATTTATGG GCACCTACGT CAACCTGTTG AACGAAGCGG CGCTGCGCTA CTTCACGGCT CACGGCATTC CCAAGCGCAC TATGGAGCAC GATATTCTCA AGATGGTGCG CGAGCGTCGC TCGTTTACCG GCGTCGCCTG GGATATGTTG AAACTAATGC GTGCAATGAG AGGGTAA
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Protein sequence | MTGRLTFDAI VVGAGPAGVA AALTMARGGL NVIIIERGRF AGAKNLFGGV FYTHALADVL PDYWERKPPF ERPVTEQGYW MLSPDSAIRV MHKSERYLKE PADAYTVLRA RFDPWFAEQA AAAGALLITR TTVTQLLKDE RGRVIGVDTD RPEGKVYAPV VIIAEGVNNL LTQQAGLIAS DLPPKYVALA VKEYINLPAK DLQIRFGLSG PREGVAIDVF GDVTLGLPGT GFIYTDQSGI SIGVGMLLDE FVTHRLRPYE VLERFKHHPV VRPYLEGGEV REYGAHLIPE MGYDRMPKLA GDGVMVAGDA AGMVDALHRE GTNLAITAGK MAGETALAAH QAGDFSAAFL SRYRRNLEGT FVLQDMKQYR RMTDFLESSP QFMGTYVNLL NEAALRYFTA HGIPKRTMEH DILKMVRERR SFTGVAWDML KLMRAMRG
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