Gene Rcas_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3596 
Symbol 
ID5541097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4694701 
End bp4695537 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID640895715 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001433663 
Protein GI156743534 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCAG TCGTTGCCAT CAAACAGGTG CCTGATACCT CAAATGTGCG TATTGATCCC 
GAAACGGGCA CGCTGATCCG CGAAGGAGTT CCTGCCATCG TCAACCCCTA CGACCTTCAC
GCCGTCGAAG CGGCGGTGCA ACTCAAAGAA CGGCTTGGCG GCGGGCAGGT GACGGTGATC
ACAATGGGAC CGCCGAAAGC AACAGAAGCG CTCCTCGAAT GCGTTGAGCA AGGCGCGGAT
CGCGCGATCC TGATCAGTGA TCGCAAGTTT GGCGGCGCTG ACACCCTGGC AACCTCGTAT
GTGCTGGCTC GCGCAATCGA GGTGATCAAC GCCGAACTAC CGGTTGACAT CATCCTCTTC
GGCAAACAGG CGATAGACGG CGACACAGCG CAGGTCGGTC CTGGCGTGGC AACCCGCCTG
AACATACCAC TGATCACGTA TGCGGTAGCG ATTGAGGAGT TTGACCTTGC AGCCCGTCGG
GCAGTGGTAC ACCGTCGGGT CGAGCAGGGC ATCGAGATAT TGGAGACGAC CTTACCGGCG
CTGCTGACGG TTGAGAAAGA GATTGCGCCG GTGCGTCATG CGCCGCTGCC GCGCCTGATT
GCAGCGGCGC GCTATCAGCC AGAAATGTGG ACAGCAACAT CACCCGTGCC CTTCGATCCG
CAGCAGATCG GGTTGAAAGG CTCACCGACC GTGGTCGGCA AGGCGTATAC CCCACCACCG
CGATCAGGAG GTGACGTCCT CTCCGTTGCC GATCTTGGTC TGGACACAGT GGTGGCGCGG
GCAATGGCGG TGATTGAGCG GGCGCATGTG GGCAACCTGC AATCTGTAAC GGAGTAG
 
Protein sequence
MHAVVAIKQV PDTSNVRIDP ETGTLIREGV PAIVNPYDLH AVEAAVQLKE RLGGGQVTVI 
TMGPPKATEA LLECVEQGAD RAILISDRKF GGADTLATSY VLARAIEVIN AELPVDIILF
GKQAIDGDTA QVGPGVATRL NIPLITYAVA IEEFDLAARR AVVHRRVEQG IEILETTLPA
LLTVEKEIAP VRHAPLPRLI AAARYQPEMW TATSPVPFDP QQIGLKGSPT VVGKAYTPPP
RSGGDVLSVA DLGLDTVVAR AMAVIERAHV GNLQSVTE