| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3590 |
|---|
| Symbol | |
|---|
| ID | 5541091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 4687131 |
|---|
| End bp | 4687826 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640895709 |
|---|
| Product | abortive infection protein |
|---|
| Protein accession | YP_001433657 |
|---|
| Protein GI | 156743528 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.72042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACA CGTTAAGCCC GCAGATGTCC GCTATCTCAC CACGATCATC GGCGCACCAG
CGGCTTGTGT CTGGTTTTGC ACTGGCCGGA TCGGTCTGGA TCGTTGGTCT CATCGGGCAC
TTCACACCGC TGGCAGAATG GCCCGCGCTC TTTCTCTACG TCCTCGGCGC CATCGGCGTG
ACCCTGTTGC TAGGGGTGCG CGATGGTCTG TGGGAAGCAA TGTGGGTGAC GCGCTGCGGT
TTAGGGCGGG CGCTGGCGTG GGGTGGCGGA ATCGGTCTGG CGCTGCTGGT GATCGACAAT
CTCAACACCT TCATGTACTA TCGTGCAGGC GGCGCGCCAA TGGCGCAGAT GGAAGCAATC
CTGATCGGCA TGCGCCTGGT CTTTCTCTTT CCGCTGCTGG TGCTGGCGGA GGAGTTTCTC
TGGCGCGGCG TCATTCTCTC TGGATTGCAC GATGCCGGGT TCAATCGCCA TCTGGCGGTG
GCGCTCACCA CGACCGCTTA TGCCCTGAAC CACTTCGCCG TCGCGCCGGT TGGCATGGTC
GAGCGCGCAA TGATGGCGGC GATGGGGTTG CCGATTGGAA TTGCCGGGGG GTATCTGGCG
CTGAAGACTC GCAGCGTCTG GGCGCCGGTC GCACTCCATG GATTGACGAT GATCTCGATG
ATTGTCGATA TCTTCGTCAT CCCCCGGTTA GTGTAA
|
|---|
| Protein sequence | MSHTLSPQMS AISPRSSAHQ RLVSGFALAG SVWIVGLIGH FTPLAEWPAL FLYVLGAIGV
TLLLGVRDGL WEAMWVTRCG LGRALAWGGG IGLALLVIDN LNTFMYYRAG GAPMAQMEAI
LIGMRLVFLF PLLVLAEEFL WRGVILSGLH DAGFNRHLAV ALTTTAYALN HFAVAPVGMV
ERAMMAAMGL PIGIAGGYLA LKTRSVWAPV ALHGLTMISM IVDIFVIPRL V
|
|---|
| |