| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3583 |
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| Symbol | |
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| ID | 5541084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4676261 |
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| End bp | 4677460 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895702 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_001433650 |
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| Protein GI | 156743521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGC TTCCGGTGAC CAATCGAGAC ACGCTGCCGA ATCTCTACGA CCTGTCGCTG
GCGGAAATGG AGCGCCTGCT GACCGACTGG GGTCAGCCTA CCTATCGCGC ACGGCAGGTC
TTTCGCCAGT TGTACGTGAA CCTGGCCGAC ACACCGCTGG CAATGACCGA CCTGCCGCTG
GCGTTGCGGG AACGTCTGGC AAACGAAACC CGCCTTGCAC CAGTGACGCC GGAACAGGTT
CAAACGGCAG ATAATGGATT GACGCGCAAG GCGCTGTTTC GCCTTCCCAA CGGCGCGCTC
GTCGAGAGTG TGCTGATGAT CTATCTCGAC CGCGCAACCG TCTGCGTTTC GACGCAGGCA
GGGTGCGCCA TGGGATGCGT CTTCTGCGCC ACGGGCACGC TCGGCTTGCT GCGCAATCTG
TCACCGGGCG AAATCGTGGC ACAGGTCGTC TGGGCAGCGC GTGAGATGCG CCGCCTGGCC
GGTCGTCCGC CTAGACCAAC GATGCGGCAA CCAGAAGACG ATGCCTGGTG GTCGCCAGAT
GATCTGGAAA ACGATGCGCC GTCCGTGCCA GAGGTCAGTT CCGTCTCACA CGTGACCAAC
ATTGTCTTTA TGGGCATGGG TGAACCGTTT GCGACCTATG ATCGCTGGTG GCGCGCCGTC
GAGATCATCC ACGATCCGCG CGGTCTGAAC ATAGGCGCGC GCAGCATGAC CGTTTCGACC
GTGGGGCTGG TTCCAGGCAT CCGGCGATTG GCGACGGAGA CGCTGCCGAT CAATCTGGCG
GTTTCACTCC ACGCTCCCGA CGATGATCTG CGCAGCGCAT TGATGCCGAT TAACCGCCGG
TATCCGCTGG CAGTGTTGCT TGATGCCACA CGCGACTATC TGGCAGCAAC CGGGCGACGG
GTGTCGTTCG AGTATGTGCT GCTCCAGGGC AAGAACGATG AACCGGAGCA TGCGGCGAAA
CTGGCAGCGC TGTTACGCGG CGAGGCAGGA CCGGCGGGGT TACCGTTGCA TCTGGTGCAT
GTCAATCTCA TCCCGTGGAA TCCGGTTCCC GGGATGCCAC TCGGGCGGTC GGAGCGCCGT
CGGGTGCTGA CCTTCCAGCG CATCCTGCGC GAGCGTGGCA TCGCCTGCAC TGTGCGCGTC
GAGCGTGGCG TGGCTATCGC AGCCGCCTGC GGTCAACTGG CGGGGGGTGT CGCATGTTGA
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| Protein sequence | MTALPVTNRD TLPNLYDLSL AEMERLLTDW GQPTYRARQV FRQLYVNLAD TPLAMTDLPL
ALRERLANET RLAPVTPEQV QTADNGLTRK ALFRLPNGAL VESVLMIYLD RATVCVSTQA
GCAMGCVFCA TGTLGLLRNL SPGEIVAQVV WAAREMRRLA GRPPRPTMRQ PEDDAWWSPD
DLENDAPSVP EVSSVSHVTN IVFMGMGEPF ATYDRWWRAV EIIHDPRGLN IGARSMTVST
VGLVPGIRRL ATETLPINLA VSLHAPDDDL RSALMPINRR YPLAVLLDAT RDYLAATGRR
VSFEYVLLQG KNDEPEHAAK LAALLRGEAG PAGLPLHLVH VNLIPWNPVP GMPLGRSERR
RVLTFQRILR ERGIACTVRV ERGVAIAAAC GQLAGGVAC
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