Gene Rcas_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3573 
Symbol 
ID5541074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4666337 
End bp4666957 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content59% 
IMG OID640895692 
Producthypothetical protein 
Protein accessionYP_001433640 
Protein GI156743511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.250853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCA CACGAGAACG CTTTGAGCAG GGGATGACGT ATGATGAATA CAAAGCGCAG 
ATGACTCGCA ACCGCGAGCG TCTGGAAGAG AACGAGCGCA CCGTTGAGCT GTCGACCGAC
GACATCGAGT TCTTCGCAAA CCTGCCAGAA CCGTTGAACG TGCTGGTGAT CACCGAGGAC
TGGTGCGGCG ATGCGATTGC CAACGTTCCC ATTTTGGGTC GCCTTGCCGC CGAAAGCGGC
AACCTCAATC TGCGCATCTT TCTCCGCGAC CAGAATCCCG ATCTGATGGA TCGGTACCTG
AACCAGGGCA TTCACCGGTC GATTCCGGTC TTTGCCTTCT TCGATCAACA GTTCCGCCCG
ATTGGGCACT GGATCGAACG TCCTGCGGTC ATAACCGAGA TGCAGGAGAA GATGCTGGCA
AACCTCTACG CGACCGATCC GGCGTTTGCC GGCGTCGTGC CAGGAACATC GATTGCAGTG
ATGCCCGACG CAGCGCGCGC GCGCTTGATG CAGGCGTTCG CCGCGTTTCG CGTCGAGACC
CGCCAGCTCG CCGATCGTGA GGTTGTGCGA GAATTGCGCG AATTGATCAG CCGGGGATTG
GCGCTTCGCC AGGAGGGATA G
 
Protein sequence
MTVTRERFEQ GMTYDEYKAQ MTRNRERLEE NERTVELSTD DIEFFANLPE PLNVLVITED 
WCGDAIANVP ILGRLAAESG NLNLRIFLRD QNPDLMDRYL NQGIHRSIPV FAFFDQQFRP
IGHWIERPAV ITEMQEKMLA NLYATDPAFA GVVPGTSIAV MPDAARARLM QAFAAFRVET
RQLADREVVR ELRELISRGL ALRQEG