| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3572 |
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| Symbol | |
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| ID | 5541073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4665152 |
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| End bp | 4666231 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895691 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001433639 |
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| Protein GI | 156743510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.573102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTT CAACCATCAT CAATGTCGGT ATCGTCGGCG CCGGCAACAT TGCCCGCGGG
CGCCATCTTC CCTGTTTCAA GAAGCATCCG AATGTCCGCC TCGCCGCCAT TTCCGACGTC
GTCGTCGATC TGGCTCAATC CGCCGCGACG GAGTACGAGA TTCCCGGCGT GTACAGCGAT
TACCGCGAGA TGTTCGAGAA AGAGAACCTC GACGCGGTGG TGATCTGTAC GCCGAACAAG
TTCCATGCCC CGGCGTCCAT CGCTGCGCTC GACGCCGGAC TGCACGTGCT CTGCGAGAAG
CCAATGGCGC TCGACCCGGT CGAAGCGCGC GCCATGGTCG CGGCAGCCGA GCGAAACAAA
AAGATCCTCA GCATCGCATT TCACTACCGC CACATGGCGC CGGTGCGCGC CGCCCGCCGC
GTCGTCGACT CAGGCGAACT GGGTCTTGTG TATATGGCGC GGGTGTACGC CCTTCGTCGT
CGCGGTGTTC CCTCATGGGG CACATTCGTC CAGAAGCACA TCCAGGGTGG TGGCGCCATG
ATCGATTTCG GCGTCCATCT GCTCGACACG GCGCTCTGGC TGATGGGCAA TCCACAGCCG
GTCGAGGTCT GCGCCAGCAT CTCGCAACAT CTCGGCAAAG CGCCGAACGT CAACCCCTGG
GGGCAGTGGA ACTACCGCGA GTTCACTGTC GAGGATCAGG CAGCGGCGTT CATCCGTTTT
GCCAATGGCG CCAGCATGCT CCTCGAGTGC TCATGGGCGC TGAATATCCC CGAAAACTAC
GAGAATGTCT CACTTTCGGG AACGACCGCC GGGCTGGAAG TCTTCCCGCT GAAGGTCAAC
AAGGCGCACC TCGATATGCT CGTCAGTTGG AAGCCCGACT GGATGCCGGG CGAACGCGAC
AATCCGGGCG ATGTGCAGAC CGCCGATTTC GTCGGTGCAA TCCTTGAAGG ACGGCAACCG
GTGTCGCAGG CACACCAGGC ATTGCAGGTC ACGGAAATTG TGGATGCAAT CTACCGCAGC
GCCGAAGCAG GCGCCGCTGT GCGCCTCGAC GGTGCAACGT CACATCCATC CCTTCACTGA
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| Protein sequence | MTASTIINVG IVGAGNIARG RHLPCFKKHP NVRLAAISDV VVDLAQSAAT EYEIPGVYSD
YREMFEKENL DAVVICTPNK FHAPASIAAL DAGLHVLCEK PMALDPVEAR AMVAAAERNK
KILSIAFHYR HMAPVRAARR VVDSGELGLV YMARVYALRR RGVPSWGTFV QKHIQGGGAM
IDFGVHLLDT ALWLMGNPQP VEVCASISQH LGKAPNVNPW GQWNYREFTV EDQAAAFIRF
ANGASMLLEC SWALNIPENY ENVSLSGTTA GLEVFPLKVN KAHLDMLVSW KPDWMPGERD
NPGDVQTADF VGAILEGRQP VSQAHQALQV TEIVDAIYRS AEAGAAVRLD GATSHPSLH
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