Gene Rcas_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3560 
Symbol 
ID5541061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4648891 
End bp4649277 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content61% 
IMG OID640895679 
Producthypothetical protein 
Protein accessionYP_001433627 
Protein GI156743498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0320162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.177975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG CCGACAAAAC TCTGACATGC CGCGATTGCG GCGCACAGTT CGTCTTCACT 
GCGGGTGAGC AGGAGTTTTA CGCGCAGAAG GGGTTCACCA ACGAGCCATC GCGTTGCCCA
AGTTGTCGGC AGGCGCGCAA AGCGTCCGGT GGAGGCGGCT ACGGCAATCG TAGCAGCGGC
GGATATAGCG AACGGAGCGG TGGGTATAGC GAGCGAGACA GTGGCTACGA TCGTGGCGGC
AGTGCGCGTT CATCGGGAGT GCGCGAAATG TACACCGCGA TCTGCGCCAA CTGTGGGCGT
GAGGCGAAAG TGCCGTTCGT TCCGAGTGGG CGCAAGCCGG TGCTGTGCGA CGATTGTTTT
CAGTCGCAGC GGCGCAATCG GATGTAA
 
Protein sequence
MSYADKTLTC RDCGAQFVFT AGEQEFYAQK GFTNEPSRCP SCRQARKASG GGGYGNRSSG 
GYSERSGGYS ERDSGYDRGG SARSSGVREM YTAICANCGR EAKVPFVPSG RKPVLCDDCF
QSQRRNRM