Gene Rcas_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3555 
Symbol 
ID5541056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4640399 
End bp4640740 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content53% 
IMG OID640895674 
Productcaa(3)-type oxidase, subunit IV 
Protein accessionYP_001433622 
Protein GI156743493 
COG category 
COG ID 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.134781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGTC ATCACGAAGA ACACAGCAGC CATGCACATG GCGAGCACAG CCATTCCGAT 
CGGTTCTACT GGCTTGTCGC CGGAGTGTTG GCGGTGGTGA CGGCGCTGGA AGTTGGATTG
TTCATTGTCA ACGAGCAACA CCTGATTGCC AAATGGCTGG AAGTGACGCT GCTGTTGATC
CTTTCGACGA TCAAAGGTGC GGCGGTGGTC ATGTTTTTTA TGCATCTCAA GGGTGATGCA
GGCATTTTCA AGTTCGTCTT CCTGGTGCCG CTTGCGTTTG CAACGACTCT GCTGCTATCC
TTTATGGTGC TATTTTCGGA GCACGTCGGC ATCGCGGGAT AA
 
Protein sequence
MAGHHEEHSS HAHGEHSHSD RFYWLVAGVL AVVTALEVGL FIVNEQHLIA KWLEVTLLLI 
LSTIKGAAVV MFFMHLKGDA GIFKFVFLVP LAFATTLLLS FMVLFSEHVG IAG