| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3549 |
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| Symbol | |
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| ID | 5541050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4629503 |
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| End bp | 4631347 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895668 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433616 |
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| Protein GI | 156743487 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0722197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGGCA AAGAATTTAC CGTCACCGGC GCGTATGCGT ATGATCACCG GTCGCCGGCG
CGCTGGGTAT GGTCGCATGT GATGCGCTAC CCGTGGTTGC CAGTCGCCTT CGTGGTGACA
GTGATCGGCA TGGCAACGCT GCAAAGCTGG AGCGCTGTGC TGGTCGGCAA TGCTTTCGAC
GCAGTGGTCG GCGGCATTAC GCCGGAACAG TTGACACGAT TGGCGTTGAT CATTCTGGGG
GTGCGCGTCG CATTCGGCGT CATCGATCTT GCCAACAGTT TTGTGGTGCA ACTGTTGGCG
CAACTGACCG AGCGTAACAC GCGCGAGGAG CTGTACGTCA GTCTGCTCGG CAAAAGCCTG
ACCTTCCACA ATCGCCAGCG CACTGGCGAC ATTATGGCGC GGGCGACGAA TGATGTGCAG
CAGATCAATT CGATGATCAA TCCGGGGATC AGTCTGATTC TCGAGTCGCT GGTGAGTCTG
ACGGTTCCGC TCATTGCCAT CACCACCATC CATCCGCACC TGCTCTTTAT GCCGGTGCTG
TTTCTCGTCA GTTTTGCGTG GGCGCTACGA CGCTACAACA ACCAGTTGAA GCCGGTGGCA
GGGGCGCTGC GCCAGCAATT TGGCGTGTTG AACGCCGGGC TTGCCGAGAC GGTCAGCGGT
ATCGAGGTGG TGAAAGGGTA TGCACAGGAA CCGGCGGAGG AGCGAAAGTT TTCCGCCAAT
GCGCGCCGTT ACCGCGATCT GTTCGTGCGC GAAGGCGGCG TTCAGGCGCG GTATCTGCCA
CTGCTCCTCT ACGGCGTGAT GCTCGGTCTC GCGTTTGGTC ATGCGCTGCT CCTCTGGCGC
GCCGGCGAAA TTTCGGTCGG GCAGATCATC GGCTACATGG GGCTGCTCGA AGTGTTGCGC
TTCCCGACCT TCATTTCGCT CTTCACGTTT TCGTTGGTGC AACTCGGCAT CGCTGGCGCG
GAACGGATGC TCTCGACCAT CACTGCAAAG ACTGAGCTCG ACGAGAATAT CGGCGGGCAT
AGCGCGCCGA TCCGAGGTGA AATCCGCTTC GAGCATGTCA GTTTCGGGTA TGAGTCGGCG
CCTGCGTATC GCATCTCTGG CAATGCGCAA CGACTGCCGC CGGTGCTGCG CAACATCACC
TTTACGGCGC ACCCTGGCGA AACGATTGCC ATTGTGGGAC AGACCGGCGC CGGAAAAACG
ACCCTGACAC GGCTGGTCAA TCGCATCTAC GACACCACCG AAGGGCGCGT GTTGATCGAT
GGTGTCGATG TTCGCGAGTG GAATCTCGAT GCGCTGCGCT CGCAGATTTC GACTATCGAA
CAGGATATTT TCCTCTTCTC GCGCACAATC GCCGAAAACA TCGCGTTTGG GGCGGCAGGC
AATGCGACCC GCGAGGAGAT CGAGTGGGCA GCGCGACAGG CGCAGGCGCA CGATTTCATT
CTGTCGTTCC CGGATGGGTA CGACACCATC ATCGGTGAGC GCGGCATGAC CCTCTCCGGC
GGGCAGCGCC AGCGCATCGC CATTGCCCGC GCGTTTCTGA CCAACCCGCG GATCCTGATC
CTCGACGACT CGACCAGCGC CATTGACAGC GCGACGGAAG ACCAGATTCA GCGCGCGATG
CGCCGCATCC TCACCGGACG CACAACATTG CTGATAACGC ATCGCATTTC GCAGATTCGG
TGGGCGGATC GGATTCTGGT GCTGAAGAAT GGTGAACTGG TCGCGCAGGG AACACACGAT
GAACTGCTTG AAACGAGCGA AGCCTACCGT CGCATTTTTC TGCGGTATGA TGCAAGCCAT
ACCGTGCCGG TTGCGGTTCG CGGCAGGCGA CAGGAGGGCG TATGA
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| Protein sequence | MSGKEFTVTG AYAYDHRSPA RWVWSHVMRY PWLPVAFVVT VIGMATLQSW SAVLVGNAFD
AVVGGITPEQ LTRLALIILG VRVAFGVIDL ANSFVVQLLA QLTERNTREE LYVSLLGKSL
TFHNRQRTGD IMARATNDVQ QINSMINPGI SLILESLVSL TVPLIAITTI HPHLLFMPVL
FLVSFAWALR RYNNQLKPVA GALRQQFGVL NAGLAETVSG IEVVKGYAQE PAEERKFSAN
ARRYRDLFVR EGGVQARYLP LLLYGVMLGL AFGHALLLWR AGEISVGQII GYMGLLEVLR
FPTFISLFTF SLVQLGIAGA ERMLSTITAK TELDENIGGH SAPIRGEIRF EHVSFGYESA
PAYRISGNAQ RLPPVLRNIT FTAHPGETIA IVGQTGAGKT TLTRLVNRIY DTTEGRVLID
GVDVREWNLD ALRSQISTIE QDIFLFSRTI AENIAFGAAG NATREEIEWA ARQAQAHDFI
LSFPDGYDTI IGERGMTLSG GQRQRIAIAR AFLTNPRILI LDDSTSAIDS ATEDQIQRAM
RRILTGRTTL LITHRISQIR WADRILVLKN GELVAQGTHD ELLETSEAYR RIFLRYDASH
TVPVAVRGRR QEGV
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