| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3546 |
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| Symbol | |
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| ID | 5541047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4624698 |
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| End bp | 4626008 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895665 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001433613 |
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| Protein GI | 156743484 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.984037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.12163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT TTCCTGCCAA CCGCGCCAGC ACCATTGCAA CTGCAATTCG CTATACGCTG
CCGAACGGCA TGGTAGCGCT GGTGCAGCGC AACCCGACCG CTCCAACGGT GAGTGTCTAC
GGCGAGGTGC GTGTTGGAGC AGTGCATGAG CCTGCCGCAC AGAATGGTGT GGCTGCATTC
ACCGGCGCCG CATTGATCCG TGGCACACAG CGACGCAGCT TCCAGGAGAT TGTCGCCACC
ACGGAAGCGG TTGGCGCAAG CGTCAACGCC GGCGGCGGTC TGCACGCCAC CCATTTCGGC
GGGCGATCAT TGAGCGAAGA CCTGGCGCTG ATCCTCGATC TTCTGGCAGA TATGCTGCGC
ACGCCCTCCT TTCCCGACGA AGAAGTCGAG CGCCTGCGCG GTCAGTTTCT GATGATGCTA
CGCGAATATG AGCAGGATAC CTCGGTGCGC GCCTCACGCG CGCTGCGGTC GCTGATGTTT
CCGCCAGCGC ATCCCTACAG TCGCCTGAGC AGCGGCACGA CCGAGACGAT CTCGGCGTTG
ACGCGCGATG ACCTGGTGCG TTTCCACACT CGCTACCACC CGGCAGTCAC AACGATTGCC
GTGGTCGGCG ATATCGAACC GGCTGACGTC ATCGATCTGA TCGAACGGTT CTTCGGCGAC
TGGCAGGCGC CTGGAAATCC GCCCCACATG ACGCTGCCCG ACCTGCAACC GTTGCCCGAT
CAGCGGCGTG TCCACGTCGC CCTCGAAGGA AAGAGTCAGA CGGACGTTAT CTGGGCGGTC
CATGGACTCG ACCGCTGTTC GCCGGATTAC TACGCCGCCA GCGTTGCCAA TATGATCCTG
GGACGCATCG GCATTGGCGG GCGTCTCGGC GAGCGGGTGC GCGAAGAACA GGGGCTTGCC
TATTCCTGCG GCAGCAGCCT CGACGCCGAC CTCGGCGCCG GTCCGTGGGC AGCGATGGCA
GGGGTCAACC CCACACACGT CGAGCGAGCA ATCGCGGCGA TCATTGCCGA AATTAAACAG
TTTGCCGCTG AAGGACCGAC GGAACAGGAA CTTGCCGATG TGCACGACTT TATGACCGGC
AGCCTGGCGA TCAGCCTCGA AACGAATGAC AGCATCGCCG GGACGCTGCT CGGCATCGAA
CGGTATCACC TTGGTCTCGA TTATGTCGAG CGCTATCCGT CGATCATTCG GCGCATCGAC
CGTGAGCAGG TTATGGATGT GGCACGTCGC TATCTGGCGA CCGACAATTA TGTCGTGGTG
ACTGCCGGAC CGGCGGTGGG AGAGGAACAC AATGAGCATA GTAACGGATG A
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| Protein sequence | MNQFPANRAS TIATAIRYTL PNGMVALVQR NPTAPTVSVY GEVRVGAVHE PAAQNGVAAF
TGAALIRGTQ RRSFQEIVAT TEAVGASVNA GGGLHATHFG GRSLSEDLAL ILDLLADMLR
TPSFPDEEVE RLRGQFLMML REYEQDTSVR ASRALRSLMF PPAHPYSRLS SGTTETISAL
TRDDLVRFHT RYHPAVTTIA VVGDIEPADV IDLIERFFGD WQAPGNPPHM TLPDLQPLPD
QRRVHVALEG KSQTDVIWAV HGLDRCSPDY YAASVANMIL GRIGIGGRLG ERVREEQGLA
YSCGSSLDAD LGAGPWAAMA GVNPTHVERA IAAIIAEIKQ FAAEGPTEQE LADVHDFMTG
SLAISLETND SIAGTLLGIE RYHLGLDYVE RYPSIIRRID REQVMDVARR YLATDNYVVV
TAGPAVGEEH NEHSNG
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