| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3542 |
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| Symbol | |
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| ID | 5541043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4620779 |
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| End bp | 4621396 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895661 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433609 |
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| Protein GI | 156743480 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4347] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0105796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.171966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTC TCTTACACTG GCTCTTCGAT TTCATCCTGC GCACGCCAAT CATCTTCTGG
AGCTGCGTTA TCGCCAACCT GATCGGCGCG GTCTGGGGCG CGGCGGTCTG GTACGGTCCG
ATGCTGGCGG CATCGCCGCT GTGGGCGTGG CTCTTCATTC CTGATTGCCC GCTGGCGGCG
TTTCTGGGCA CGATTGCGCT CTTCGGCATG CGCGCCGGGA GGCGCTGGTC CTTCTTCTAT
GCGTTGACGG CGTTCGCCTG TATTCACTAC GGCATCTGGA CGCTGGCGTT CTGGCTGCGG
CAGTGGACCG GGGCAGGCGT CATTGATCCG TTCGAGGTGG TCCTGTTCGT CACGCATATC
GGGTTGCTCT GCGAGGGGAT CCTGTTTGCC ACACGCCTGG GTGAGGTGAC CGTTCTACAG
CGTGTTGCGG TCGTTGGTTG GTTCGTGCTG GCGTTCGGCG TTGATTATGG GCTGGGGTAT
CACCCTCCGC TGGCGAGCCA TGTCACCTTC GATTTCATTA TGTGGCTGAC GGTGGCGCTA
ACCGGTGGGT TGAGCATCGC ACTGCTGGCA TTGCCACGCC GCGCTGCTCA ACCGGTGCGC
CTGTCGACGG CGGCGTGA
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| Protein sequence | MIRLLHWLFD FILRTPIIFW SCVIANLIGA VWGAAVWYGP MLAASPLWAW LFIPDCPLAA
FLGTIALFGM RAGRRWSFFY ALTAFACIHY GIWTLAFWLR QWTGAGVIDP FEVVLFVTHI
GLLCEGILFA TRLGEVTVLQ RVAVVGWFVL AFGVDYGLGY HPPLASHVTF DFIMWLTVAL
TGGLSIALLA LPRRAAQPVR LSTAA
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