| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3530 |
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| Symbol | |
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| ID | 5541029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4598986 |
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| End bp | 4600998 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895648 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001433598 |
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| Protein GI | 156743469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.220409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCC GCATCGAAGC GCCCTTTCAA CCGGCCGGCG ATCAGCCGAA GGCGATCGCG
CAACTGGTCG AGGGGATTCG CGCAGGATAT AAACATCAGA CATTGCTCGG CGCGACCGGC
ACCGGCAAGA CGCTCACCAT GGCGCATGTC TTCAGTCAGT TGGAGCGTCC GGCGCTGGTC
ATGGCGCACA ACAAAACACT GGTCAGTCAG TTGTACGCCG AGTTTCGCGA ACTGCTGCCC
GACGCGGCGG TGGAAATGTT CATTTCGTAC TACGACATGT ACACCCCCGA AGCGTATGTG
CCGAGCAAAG ACCTGTACAT TGAGAAGGAA GCCGAGATCA ACGAAGAGAT CGACCGCCTG
CGCCACGCGG CGACGCAGGC TCTCTTCACC CGGCGCGATG TCCTGATTGT CGCGTCGGTG
TCGGCGATCT ACGGTCTCGG TTCGCCCCAT GAGTATGGTC AGGTCGTCAT TCCTATCCGC
GTCGGCGAGG TGCGCAACCG CGATAAACTG CTGCGTCAGT TGCTCGACCT GCAATTCGAG
CGCAACGATA TGGACTTTCA TCGCGGCACG TTCCGTGTGC GTGGCGATAC CCTCGACATC
TTCCCCGCCA ATCAGGAGAT TGCGCTTCGC GTCGAGTTCT GGGGCGATGA TGTCGAGCGT
ATTACCGAGT TCGACCCACT GACCGGCGAG GTGCTGATCG AGCGCACGGC GGTGAATATC
TATCCGGCGA AGCACTTCAT TACAACCGCC GAAACGCTCA AACTGGCGAT CACCGACATT
CAGGCGGAAC TGGCAGTGCG TCTTGCCGAA CTCGAGCAGC AGGGGAAACT GCTCGAAGCA
GCGCGCCTCA AGCAGCGCAC CAACTACGAC CTCGAAATGC TCTCCGAGGT CGGCTACTGT
TCCGGTATCG AGAACTACTC GCGGCACCTC GACCGTCGCG CGCCCGGGCA GACGCCGTGG
ACGCTGCTGG ACTATTTTCC CGATGATTTC ATTCTCTTCA TCGATGAGTC GCACATAACG
CTGCCGCAGA TTCGCGGCAT GTACGCCGGC GACCGATCGC GCAAGGAGAC GCTCGTCGAC
TACGGCTTCC GCCTCCCCTC CGCGCTCGAC AACCGACCGC TGCGATTCGA TGAGTTCGAG
CGCCATATCC ATCAGGTGAT CTATGTCTCG GCGACGCCGG GACCCTATGA ATATGAACAT
TCGCAGCAGA TCGTCGAGCA GATCATTCGC CCGACCGGTC TGCTCGATCC GACGGTCGAG
GTGCGCCCGA CGCGCGGACA GATTGACGAT CTGGTCGGCG AGATCAAGCG GCGGGTGCAG
AAAGGGCAGC GCGCACTGGT CACGACGCTG ACCAAGCGCA TGGCGGAGGA CCTGGCGGAT
TACCTGAAGG AAATGGGCAT CCGCACCAGT TATCTGCACT CCGACATCGA GACGCTCGAA
CGGGTCGAAA TTCTGCGCGA CCTGCGGCTT GGCGTGTACG ATGTGGTTGT TGGCATCAAC
CTGCTGCGCG AAGGTCTCGA CCTGCCGGAA GTATCGCTGG TCGCTATTCT CGACGCCGAC
AAGGAAGGAT ACCTGCGCAG CGGATCGTCG CTCATTCAGA TTATCGGGCG CGCCGCGCGG
CACATCGAGG GCGCGGTGAT TATGTACGCC GATACGATCA CGCCATCGAT GAAGTTCGCC
ATCGACGAAA CCAACCGTCG TCGTGCCATC CAGGAAGCGT ACAACCGCGA GCACAACATC
ACGCCGGTCG GCATCTCGAA AGCCGTGCGC GACCTGACCG ACCGGGTGCG TAAAGTCGCC
GAGGAGCGTG GTGTCTACCA GGCTGCCGTA CCAGGGGAAG AATTGCCCAT TCCGAAGGAC
GAGATCGTCA AACTGATCAA GGAACTGGAG AAGCAGATGA AGCAGGCGGC GAAGGAGTTG
GCGTTCGAGA AGGCTGCTGC CCTGCGTGAT CAGATCATCG AACTGCGGCG CACCCTGGCG
CTTGATGAGG AGCAGGCGCC GGCGCACTCG TAG
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| Protein sequence | MSFRIEAPFQ PAGDQPKAIA QLVEGIRAGY KHQTLLGATG TGKTLTMAHV FSQLERPALV
MAHNKTLVSQ LYAEFRELLP DAAVEMFISY YDMYTPEAYV PSKDLYIEKE AEINEEIDRL
RHAATQALFT RRDVLIVASV SAIYGLGSPH EYGQVVIPIR VGEVRNRDKL LRQLLDLQFE
RNDMDFHRGT FRVRGDTLDI FPANQEIALR VEFWGDDVER ITEFDPLTGE VLIERTAVNI
YPAKHFITTA ETLKLAITDI QAELAVRLAE LEQQGKLLEA ARLKQRTNYD LEMLSEVGYC
SGIENYSRHL DRRAPGQTPW TLLDYFPDDF ILFIDESHIT LPQIRGMYAG DRSRKETLVD
YGFRLPSALD NRPLRFDEFE RHIHQVIYVS ATPGPYEYEH SQQIVEQIIR PTGLLDPTVE
VRPTRGQIDD LVGEIKRRVQ KGQRALVTTL TKRMAEDLAD YLKEMGIRTS YLHSDIETLE
RVEILRDLRL GVYDVVVGIN LLREGLDLPE VSLVAILDAD KEGYLRSGSS LIQIIGRAAR
HIEGAVIMYA DTITPSMKFA IDETNRRRAI QEAYNREHNI TPVGISKAVR DLTDRVRKVA
EERGVYQAAV PGEELPIPKD EIVKLIKELE KQMKQAAKEL AFEKAAALRD QIIELRRTLA
LDEEQAPAHS
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