| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3529 |
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| Symbol | |
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| ID | 5541028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4597148 |
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| End bp | 4598854 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895647 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001433597 |
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| Protein GI | 156743468 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA TTCGGTTTGC TGATGGAGGC GCAACGCTGG AGACCGACCG CATCCGCCAT
GAGGCGCTCA ACACGCCGGT CATCAATAAA GGCAGCGCCT GGAGCGCCGA AGAGCGCGAA
GAATTGGGAT TGCTGGGGTT GTTGCCATAC CACGTTTCGA CCATCGAGGA ACAACTGGCG
CGTGTGTACC GCAATTATCA GCAGCGGAAA GACGACCTGG ACCGCTACCT GTATCTGACC
GATTTGCAGG ATCGAAATGA GACGCTCTTC TACCGATTGC TGCTTGAGCA TATCACCGAG
ATGATGCCGA TCGTCTACAC GCCGGAGGTT GGCGTCGCCT GTCAACGCTA CAGTCACCTG
TTCCACCGAC CACGCGGGTT GTTCATCGAC TATCCGCACC GCGATCAGAT CGAGACGATG
CTGCGCGGCT GGCCCCTGGC AGAGCACACG CGCGCCATTG TCGTCACCGA TGGGGAACGC
ATTCTGGGGC TTGGCGATCA GGGCATCGGC GGCATAGGCA TTCCCATTGG CAAACTGACG
CTCTACACCC TTTGCGCCGG CATTCATCCG GCGACAACGC TACCGATTGT GCTCGATGTC
GGCACGAATA ACCCGGCGCT GCTCAATGAC CCGCTCTACC TGGGGTGGCG TCACGAACGG
GTGCGCGGCG AGGAGTACGA CGAGTTCATC GAACAGTTCG TGACGGCGGT TGAGAAGGTG
TTTCCGAATG TGTTGCTGCA ATGGGAGGAT TTTGCCAAGG ACAACGCGCG CCGCCTTCTT
GACCGTTACC GTGACCGGAT TCTCAGTTTC AACGATGACA TTCAGGGCAC CGGCGCGGTG
ACGCTGGCGG GATGGCTGGC AGCGGTCGAG ATTTCCGGCG TGCCGCTGGC GGAACAGCGG
ATCGTGATGT TGGGCGCAGG GTCGGCAGCG ACCGGCATTG CCGATCAGAT CGTCGCCGTC
ATGGTCGAGG CTGGCATACC GCTGGAACAG GCGCGCCGGA CGATCTGGCT GATCGACAGC
CGCGACCTGG TGCATACCCG GCGCACCGGT CTCGAAGAGG CGAAAATGGT CTATGCTCAA
CCGTATGAAG CCCTGGAAGG ATGGGCGCGC GAAGGGGATG GACCGTTCAC CTTGTATGAG
GTTGTCGCTC ATGTGCGTCC AACCTGTCTC ATCGGCGCCT CAGCGCAGCC GGGCGTGTTC
GACGAGCGCA CGGTACGCGA AATGGCGCGG CATGTCGAGC GCCCGGTGAT CTTCCCGCTT
TCCAATCCCA CCTCAAAGAG TGAAGCGGTT CCTGCCGATC TGATCGCCTG GACGGAAGGG
CGGGCGCTGG TCGCCACCGG CAGTCCGTTC GAGCCGGTGG TGTATGGCGG GAGAACCTAT
GTCATCGGGC AGTGCAATAA TGTCTTCATC TTCCCTGGCG TCGGGTTGGG GGTTCTGGCA
GTGAACGCCC GGCGCGTCAG CGATGCCATG TTCGTGGCGG CGGCGCGCGC ATTGAGCGCC
TTCTCGCCAG CACGGCAGGA CCCAACGGCA TCGCTCTATC CGTCGCTTAC CAGCGTGCGT
GATGTTTCAC GCGCTGTTGC GCAGGCTGTG GCGGCTGAGG CAGTGCGTTC CGGGTTGGCG
GCGCCGCTCA GCGCCGATGA ACAGGCGGCA CGCATTGCGG CGACCATGTG GACGCCGGCG
TACCCACGGG TGCGAAAGAT GTCGTAA
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| Protein sequence | MIRIRFADGG ATLETDRIRH EALNTPVINK GSAWSAEERE ELGLLGLLPY HVSTIEEQLA
RVYRNYQQRK DDLDRYLYLT DLQDRNETLF YRLLLEHITE MMPIVYTPEV GVACQRYSHL
FHRPRGLFID YPHRDQIETM LRGWPLAEHT RAIVVTDGER ILGLGDQGIG GIGIPIGKLT
LYTLCAGIHP ATTLPIVLDV GTNNPALLND PLYLGWRHER VRGEEYDEFI EQFVTAVEKV
FPNVLLQWED FAKDNARRLL DRYRDRILSF NDDIQGTGAV TLAGWLAAVE ISGVPLAEQR
IVMLGAGSAA TGIADQIVAV MVEAGIPLEQ ARRTIWLIDS RDLVHTRRTG LEEAKMVYAQ
PYEALEGWAR EGDGPFTLYE VVAHVRPTCL IGASAQPGVF DERTVREMAR HVERPVIFPL
SNPTSKSEAV PADLIAWTEG RALVATGSPF EPVVYGGRTY VIGQCNNVFI FPGVGLGVLA
VNARRVSDAM FVAAARALSA FSPARQDPTA SLYPSLTSVR DVSRAVAQAV AAEAVRSGLA
APLSADEQAA RIAATMWTPA YPRVRKMS
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