Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3522 |
Symbol | |
ID | 5541021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4588472 |
End bp | 4589629 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895640 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001433590 |
Protein GI | 156743461 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.828408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTCG CTATCAATGC GCATCTTCTT GCCCATACGC GCACCTTTCG GCGCGCCGGG GTATCGAACT ATGTTGAGGC GCTGCTCATT CATCTGGGAG CGATCGACCG TCAGAACCAG TACACGGTAT ATACGACGCG CGGCCTCGAC AATGGAGCGC TCGGATTGCC GTCCAACTTC TATGTGCAGC CCAGCCGCCT CCCGACGATC AATCCGCGCG TTCGCATTCC GTGGGAGCAA CTGTTGGCGC CGGCGCTGCT TCGCTTCGCT CGCGCCGATG TGTACCATGG GGTGCTCAAC GTTATGCCCC TCGTCTGCCC GGTTCCATCG GTCGTCACTA TTCACGATCT GAGCGCGTTT CTGTTTCCGC AGACCTTTCG CCGCGTCAAC CGGATCTATA CCCGATGGGC GATCCGGGTT GCCGCGCGCC GCGCCCGCTA TCTTCTGGCG GTGTCGGAGT TTACCCGGCG CGAGATTGTG CGCTGGCTCC ACGTTCCGCC AGAGCGCGTA GTGGTGACGC CCAACGCTGC GGATGCACGC TTCGCGCCTC CCGATCCAAC CACGCTCGAG GCGTTTCGTC GCCGTGCCGG GTTGCCCGAC CGGTTTGTGT TGTTCCTCGG CACGCTTGAG CCGCGCAAGA ATCTGACACT GCTCCTGGAA GCATATGCCC GGATTGTGCG CGATGTTGAT GCGCCGCTGA TCATCGGCGG CGCAAAGGGA TGGCTGTACG AGCCGATCCT GGCGCGCGCT GAACAACTTG GACTCGGCGA CCGGCTCCGC TTCGTCGGGT ATATCGACCA GGAGGATCAA GCGCTCTGGT ATGCGGCGGC TACGATCTTT GTCTTTCCGT CGTTGTATGA AGGGTTTGGC ATGCCGCCGC TCGAGGCGAT GGCATGCGGC ACGCCGGTGA TCGTCAGCAG TAGCAGTAGC CTCCCCGAAG TGGTGGGGGC GATTGATGGA CATCCCGATC AGGCGGCAGC GCTCATTGTG CCGCCAACCG ACGCCGATGC GCTGGCGGAG GCGATGTTGC GACTGCTCTC CGATGCAGAG TTGCGCGCCG AGTTGCGCGC CCGCGGGCTT GCGCGCGCGC GTTGCTTCTC CTGGCGCACG ACGGCGGAGC GAACGCTGGA GGTGTACCGG CAAGCAGCAT GTGGGTGA
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Protein sequence | MHVAINAHLL AHTRTFRRAG VSNYVEALLI HLGAIDRQNQ YTVYTTRGLD NGALGLPSNF YVQPSRLPTI NPRVRIPWEQ LLAPALLRFA RADVYHGVLN VMPLVCPVPS VVTIHDLSAF LFPQTFRRVN RIYTRWAIRV AARRARYLLA VSEFTRREIV RWLHVPPERV VVTPNAADAR FAPPDPTTLE AFRRRAGLPD RFVLFLGTLE PRKNLTLLLE AYARIVRDVD APLIIGGAKG WLYEPILARA EQLGLGDRLR FVGYIDQEDQ ALWYAAATIF VFPSLYEGFG MPPLEAMACG TPVIVSSSSS LPEVVGAIDG HPDQAAALIV PPTDADALAE AMLRLLSDAE LRAELRARGL ARARCFSWRT TAERTLEVYR QAACG
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