Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3514 |
Symbol | |
ID | 5541013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4579807 |
End bp | 4580280 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640895632 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001433582 |
Protein GI | 156743453 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCAA TCGGAGAAAA GGCGCCCGAC TTTATCGCAA CGACACAGAG CGGCGAACCG TTTCAACTCT CTTCGTTACG TGGACAGAAG GTGGTGCTCT TCTTTTACCC CAAAGCCGAC ACCCCGACAT GTACGACAGA AGCATGCAGT TTTCGTGATA GCTATGCCGA AATCCGTGCA CGTAGCGCGA TTGTGGTCGG GGTCAGTCCA GACACCGTGA CGGCGCAGGC GGCATTTCAC GATAAGCACC ACCTTCCCTA CCTCTTAGTC GCCGATGCCG ACCATCGAGT GAGTGATCTC TATGGCGTGT GGGGAACACA TCAGGTTCGG CGTGAAGACG GCACGGAGGT GACCTACACC GGTGTGTTGC GCACCACGTT CATTATTGAT GAACAGGGTG TTGTGCAACG AGTGTTTCCG AATGTGGACG TGCGTGAACA TACTGCTGAA GTGTTGTCGG CGCTTGAGCA GTGA
|
Protein sequence | MPAIGEKAPD FIATTQSGEP FQLSSLRGQK VVLFFYPKAD TPTCTTEACS FRDSYAEIRA RSAIVVGVSP DTVTAQAAFH DKHHLPYLLV ADADHRVSDL YGVWGTHQVR REDGTEVTYT GVLRTTFIID EQGVVQRVFP NVDVREHTAE VLSALEQ
|
| |