Gene Rcas_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3514 
Symbol 
ID5541013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4579807 
End bp4580280 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content55% 
IMG OID640895632 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001433582 
Protein GI156743453 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAA TCGGAGAAAA GGCGCCCGAC TTTATCGCAA CGACACAGAG CGGCGAACCG 
TTTCAACTCT CTTCGTTACG TGGACAGAAG GTGGTGCTCT TCTTTTACCC CAAAGCCGAC
ACCCCGACAT GTACGACAGA AGCATGCAGT TTTCGTGATA GCTATGCCGA AATCCGTGCA
CGTAGCGCGA TTGTGGTCGG GGTCAGTCCA GACACCGTGA CGGCGCAGGC GGCATTTCAC
GATAAGCACC ACCTTCCCTA CCTCTTAGTC GCCGATGCCG ACCATCGAGT GAGTGATCTC
TATGGCGTGT GGGGAACACA TCAGGTTCGG CGTGAAGACG GCACGGAGGT GACCTACACC
GGTGTGTTGC GCACCACGTT CATTATTGAT GAACAGGGTG TTGTGCAACG AGTGTTTCCG
AATGTGGACG TGCGTGAACA TACTGCTGAA GTGTTGTCGG CGCTTGAGCA GTGA
 
Protein sequence
MPAIGEKAPD FIATTQSGEP FQLSSLRGQK VVLFFYPKAD TPTCTTEACS FRDSYAEIRA 
RSAIVVGVSP DTVTAQAAFH DKHHLPYLLV ADADHRVSDL YGVWGTHQVR REDGTEVTYT
GVLRTTFIID EQGVVQRVFP NVDVREHTAE VLSALEQ