Gene Rcas_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3506 
Symbol 
ID5541005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4574116 
End bp4574496 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content55% 
IMG OID640895624 
Producthypothetical protein 
Protein accessionYP_001433574 
Protein GI156743445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGTC CTGGCTCAAC GACCTATGTT TTCGTAGAGG GTCCGCGCTG GAGTACACGG 
GGGTATGAGC AGGTTGCCGC AGGCTGGCGC GCTTATCTGA ACTCGCCAAT TCGCATCACC
CATTGGCAAT GGAGCGAAGG TCCGCTCAGT GAGGTATGGA GCGATAGCGC CTTCATCGCC
GGTCTGCTTG ATCTACACGT CTGTATTGGT GAAACAAGCC GTACCGTGCG CTTGCGCGCT
ACGTTTGTGC TCCATCGCGA TCCGGACAAC CAATGGCAAA TTGTCCACGA GCATGTCTCA
CAACCGATGG TCGATCCCTA TGGAATTGGC GATTGGCTGG AGATAGCCAA CGATGCATCG
AGTAATGGCC CTCTTGCATA A
 
Protein sequence
MYRPGSTTYV FVEGPRWSTR GYEQVAAGWR AYLNSPIRIT HWQWSEGPLS EVWSDSAFIA 
GLLDLHVCIG ETSRTVRLRA TFVLHRDPDN QWQIVHEHVS QPMVDPYGIG DWLEIANDAS
SNGPLA