Gene Rcas_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3505 
Symbol 
ID5541004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4572914 
End bp4574011 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content55% 
IMG OID640895623 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001433573 
Protein GI156743444 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCAC ACTTCATATC GTTCACGCTC TCGTATGGTT ATGACTCATT GCAAGAAGAG 
CATCGCATGA GCCAGTTTGA TTCGTATCGC GCGCTGGCGC TGCAAGTTAC CTGCCATGCT
GTTAACGCCC TGAACAATCG GGTGGCTGTC CGTGAGCAGA TGTTGGCGAC TATTGTGCGG
CTGCGTGAAC AGATACGCGC CAGTATCGCC TTTATCGGCA ATGATGTGCG GCTCGTGGTT
TTGCCCGAAT ATTTCCTGAC CGGCTTTCCG TTGGGTGAAA GCATCGCTGT ATGGTCGGAA
AAAGCCGCGA TTGATCCGGA TGGTCCCGAA TATGCTGCAC TTGGTCAGAT TGCGTGTGAT
CTGCAAATCT TTCTTGCCGG TAATTGCTAT GAACGTGATC CGCACTTTCC CGGTCTCTAT
TTTCAGGTGA GCTTTGTCAT TGACCCTTCC GGTCAGTGTG TGCTGCGCTA CCGACGCTTA
AACTCGATGT TTGCGCCGAC GCCGCACGAT GTGTGGGATC GATTTTGCCA AATGTACGGT
CCTGATGCGC TCTTCCCGGT CGCCGACACT GCAATCGGGC GGTTGGCCTG CATCGCCTCA
GAAGAGATTC TCTTCCCCGA AGTTGCGCGT TGTCTTGCGA TGCGTGGCGC CGAAGTATTT
CTCCATTCAT CTTCGGAAGT GAGCAGCCCG GAATTAACCC CGAAGCACAT CGCCAAACGA
GCGCGCGCGT TAGAAAATCT GGCCTATGTC ATTTCGGCGA ACTCTGCCGG TATTAGTGGC
ATTCCAATCC CTGCTGCCTC GGTTGAGGGC GGTTCGCAGA TTGTTGATTA CACAGGGCGC
GTGTTAGTCG AAGCCGGCCA GGGCGAGAGC ATGGCGGCCC ACGCTGAGAT CGATCTTGCC
GCGCTCCGGC GCTACCGTCG TCGCCCTGGC ATGAACAACC TGCTGAGTCG TCAACGGTTT
GATCTGTATG CCAGCAGTTA TGCGACTGCC GGCTTTTACC CGCCGAATAC GTTGTTGACC
GGTGTTGCGG AACGGCAACA TTTTCTGCGT GTGCAACAAG AGACGATTGA GCGCCTGGCG
CAGAAGGGGA TAATTTGA
 
Protein sequence
MAAHFISFTL SYGYDSLQEE HRMSQFDSYR ALALQVTCHA VNALNNRVAV REQMLATIVR 
LREQIRASIA FIGNDVRLVV LPEYFLTGFP LGESIAVWSE KAAIDPDGPE YAALGQIACD
LQIFLAGNCY ERDPHFPGLY FQVSFVIDPS GQCVLRYRRL NSMFAPTPHD VWDRFCQMYG
PDALFPVADT AIGRLACIAS EEILFPEVAR CLAMRGAEVF LHSSSEVSSP ELTPKHIAKR
ARALENLAYV ISANSAGISG IPIPAASVEG GSQIVDYTGR VLVEAGQGES MAAHAEIDLA
ALRRYRRRPG MNNLLSRQRF DLYASSYATA GFYPPNTLLT GVAERQHFLR VQQETIERLA
QKGII