Gene Rcas_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3502 
Symbol 
ID5541001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4570236 
End bp4571000 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID640895620 
Producthypothetical protein 
Protein accessionYP_001433570 
Protein GI156743441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGC ATATCGAGTT CATTCACGTT GACGATGTTC CCTGGCAACC GTGGCCATTC 
GGCTCGACAG GCGCCTGCAC ACGCACCCTC AGTTGCGATC CAGATACCGG TGCGACAACG
CTGCTCGTGA GTCTGCCGGC AGGTTGGGCA GCGCCGGAAG GGTTTTTCAC CGCCGATGTT
GAATTCTACA TTATGCAGGG TGAATTAGTA TCCAACGGGT ATCGGCTTGC GCGCCATACC
TATGGCTTCT TGCCGGCAGG CGTGGTGTAC GGACGCTTAC AGGCCAGTTC ACCCGTCACC
CTGCTCTGGT TTACGCATGG TGAATCTCGC TTTGCGATCA GTGCGACCGA TGCGCCGGGT
GCACGCCGTC GCGGTCTCAT TCACGCGATG GACAGTTCGG CGGCGCCCTG GAGCAACACG
ATCACTCCCG GTTTTCCCCC CGGAGCGATG CGAAAATCAC TGCGCATCGA TCCCGATACC
GGCGCCGGTA CATGGCTGCT CGGCGTGCTT CCTCAGTGGC GTGAGCCGCG TGTCGAGATC
CATCCGGTGG CGGAAGAAGC GTTCATCATC TCTGGCGAGA TGGTCACCGA TCGCGGTGTC
ATGGTTGCCG GTTGCTACTT TTGGCGCCCG CCCCATATTC CCCATGGTCC GTTTGCAACC
GAAACCGGCG TCTTGATTCT GTTTCGGACT GATGGTCATT TGCACACGTT CTACCGCTGG
CCGGATCAAC CGTCCGGGTC ATCATCAGGT TCGCCAGGCT ATTGA
 
Protein sequence
MRPHIEFIHV DDVPWQPWPF GSTGACTRTL SCDPDTGATT LLVSLPAGWA APEGFFTADV 
EFYIMQGELV SNGYRLARHT YGFLPAGVVY GRLQASSPVT LLWFTHGESR FAISATDAPG
ARRRGLIHAM DSSAAPWSNT ITPGFPPGAM RKSLRIDPDT GAGTWLLGVL PQWREPRVEI
HPVAEEAFII SGEMVTDRGV MVAGCYFWRP PHIPHGPFAT ETGVLILFRT DGHLHTFYRW
PDQPSGSSSG SPGY