| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3499 |
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| Symbol | |
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| ID | 5540998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4565995 |
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| End bp | 4567845 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895617 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433567 |
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| Protein GI | 156743438 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.44118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCTC ATGTGCGCGA ACGGATCTGG ATCATCGCGC TCTGTGGATC GGCGCTGATC
TTTCCGCTCA TCTTTCCATC AACCGAGCGC AACTTCTGGA CCTATTATAG CGCCACAATC
GGTGTCACCA TTCTGCTCGC TTCAGCGCTC AATCTGTCGT TGGGATATAC CGGTCTCTTT
TCAATGGCGC ATAGTGCACT GTATGCTGTT GCCGCGTATA CCTCAGCCGT GTTGGTGACA
CGCGCCGGAT GGCCGTTTTG GCTCTCGCTG CCGGTGGCTG TCTGCCTTAC CGCGCTGGTC
GGAGCATTAA TGGCAGTGAC GACATTGCGG GCCTCGAACC TTTATTTCGC TGTGATTACG
TTGGCCTTTG CTCTGCTTAT CCAAGAACTG GCCCGTGTTT GGACGCCGAT CACCGGCGGG
CTGTTCGGCT TACACAGTGT GCCACGTCCG TCATTCGGCG ATCAACCGAT GAGCCTGGCG
ACATATTTCT TTTTCATCTG GTTCATGGTG GGCATCGCTC TCTGGGGATT GGCAAATATT
GTCGATTCGC GTTACGGACG CGCCTTTCGT GCTCTTAAGT TGCGTGAAGA GGCGGCTGCG
GCTTTAGGGG TCGCCCCTTT ACGCTACAAA TTGATCGCTT TCAGCTTGAG TGCGGCGCTG
GCAGGGGTCG CCGGCGTGTT ATTCGTGCAT CTTGCCGGTT TTGTCGCCCC TGAGATTGCC
GGTCTCGACG CCGGATTATT GCTCTTCGTC AGCGTTTTCA TTGGCGGCGT CGGAACCCTT
ACCGGACCGG TGATCGGCGT CCTCTTTGCC AGCGGATTGC AACAGGCGAT TGGCAATACA
CTCGATGCCG CTTATCAACA GTTGATCTTC GGCGCCGTGA TGTTGTTGAC CATGCTGGTA
TTGCCTGCCG GTCTGATCGG AACGCTGCGC GCGTGGCAAG CCCGACGCGC CGCCCGCGCT
ATCTCGGTTA CGGAGCCGTC TACGCCTGAA CGACTGCTTG ATGCCGATGT CATTCGCCAG
ATTATTGGCT TTGAAGAGAT GGTTGTAACC GATACCACCC CACTACTCAG CGCGCGCGGC
GTCGTCAAAT CGTTTGGCGG GTTGCAAGCG CTTAAGGGGG TTGATCTTGA CATCACTCCC
GGCACCATCC ACGGCTTGAT CGGCCCGAAT GGTTCTGGAA AATCCACACT GGTCGGGTGC
CTGACGGCGT ACCATCGTTG CGATCAAGGA ACGATCCGAT ACGCAGAGGC GCCTTTGCCG
AAGCAGATGC ATCAAGTGGC TGCTGCTGGG ATTGTGCGCG TGTTCCAGAC CCCGCACCTG
TTCGGCGATA TGAGTGTGCT TGACAACGTG CTGGCCGGAT TTCATCTGCG CTCACGCCAG
CGTTTCTTCG GTACGCTGCT CCAACTGCCT GCCGACCGTC AGGACGAGCA GACTCTACGC
GATGCTGCAT TGAAGTTGCT TGCGATTGCC GGCATGGCCG ACAAGGCGCA CCTGCTGGCC
AGCCAGTTAC CGCATGGCCA ACAGCGGATG CTCGAAGTCA TTCGCGCGCT GGCGATGCGT
CCGCGTCTTC TCATTCTCGA TGAACCGGCT ACCGGTCTGG TCGCGCAAGA GATTCAGGCT
TTGGCGACAT TACTGTTACG CTTACGTGAA ATTGGTCTGA CCATTCTGCT CATTGAGCAC
AACATGTCGT TTGTCATGGG TATATGTGAT CGAGTCACTG TTTTGGAAGA GGGGAGCAAA
ATCGCCGATG GCGTGCCGCA CGATGTGCAA CGCGATCCCG AGGTTATTCT GGCATATCTT
GGTGAAAGCG CTGAACAGGC GCACCTGAAT CTGCCGGCGC CGGTGGAATG A
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| Protein sequence | MLAHVRERIW IIALCGSALI FPLIFPSTER NFWTYYSATI GVTILLASAL NLSLGYTGLF
SMAHSALYAV AAYTSAVLVT RAGWPFWLSL PVAVCLTALV GALMAVTTLR ASNLYFAVIT
LAFALLIQEL ARVWTPITGG LFGLHSVPRP SFGDQPMSLA TYFFFIWFMV GIALWGLANI
VDSRYGRAFR ALKLREEAAA ALGVAPLRYK LIAFSLSAAL AGVAGVLFVH LAGFVAPEIA
GLDAGLLLFV SVFIGGVGTL TGPVIGVLFA SGLQQAIGNT LDAAYQQLIF GAVMLLTMLV
LPAGLIGTLR AWQARRAARA ISVTEPSTPE RLLDADVIRQ IIGFEEMVVT DTTPLLSARG
VVKSFGGLQA LKGVDLDITP GTIHGLIGPN GSGKSTLVGC LTAYHRCDQG TIRYAEAPLP
KQMHQVAAAG IVRVFQTPHL FGDMSVLDNV LAGFHLRSRQ RFFGTLLQLP ADRQDEQTLR
DAALKLLAIA GMADKAHLLA SQLPHGQQRM LEVIRALAMR PRLLILDEPA TGLVAQEIQA
LATLLLRLRE IGLTILLIEH NMSFVMGICD RVTVLEEGSK IADGVPHDVQ RDPEVILAYL
GESAEQAHLN LPAPVE
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