| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3498 |
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| Symbol | |
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| ID | 5540997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4565258 |
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| End bp | 4565968 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640895616 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433566 |
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| Protein GI | 156743437 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.273172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAGC TGGAAATGGT CAGTGCCGGT TATGGCGCGG TTGTGGCAGT GCGTGACATC
ACGCTGCACA TCAATCGCGG TGAGTTTGTC ACTCTGATTG GCAGCAACGG CGCCGGCAAG
AGTACGATTC TGCGCACGAT TTCGGGCTTG ATCAAACCGA GGCAGGGGAC TATCCGCTTT
GAAGGCAAGC GCATTGATGG TTTGGCGCCA CACTCAATTG TGCGCGCTGG CATTGCGCAC
GTGCCTGAAG GCCGGCATGT CTTCCCCGAT CTGTCGGTAG CCGAGAATCT CGAAATGGGT
GGATTTATTT GGCGGCGCGA ACCGGCCCAA TTTCGTGAAG CGCTTGATCT CGTCTACAGT
ATGTTTCCCA AATTGGCTCA ACGGCGTGCG CAAATGGCAG GAACATTGAG CGGCGGCGAA
CAGCAGATGC TTGCTGTTGG CCGCGCTTTG ATGTCCCGAC CTCGCCTGCT CTTGCTCGAT
GAACCATCGC TCGGACTTGC ACCGAAGATC GTGCTCGAAA TGTTCAATCT CTTTGCCCAC
CTGCATCGAA CAACCGGTTT GACCATTCTG CTGGTCGAGC AACTGGCCGC ACTGACGCTT
GAATACACTC AACGCGGTTA TGTGCTCGAA CGCGGCGAGA TTAAGTTGTC GGACAGCAGC
GCAGCACTGC GCTCGAATCC GCGTGTGCAA CAAATCTACC TGGGAGCATA A
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| Protein sequence | MLELEMVSAG YGAVVAVRDI TLHINRGEFV TLIGSNGAGK STILRTISGL IKPRQGTIRF
EGKRIDGLAP HSIVRAGIAH VPEGRHVFPD LSVAENLEMG GFIWRREPAQ FREALDLVYS
MFPKLAQRRA QMAGTLSGGE QQMLAVGRAL MSRPRLLLLD EPSLGLAPKI VLEMFNLFAH
LHRTTGLTIL LVEQLAALTL EYTQRGYVLE RGEIKLSDSS AALRSNPRVQ QIYLGA
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