| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3489 |
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| Symbol | |
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| ID | 5540988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4552145 |
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| End bp | 4555264 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895607 |
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| Product | WD-40 repeat-containing serine/threonin protein kinase |
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| Protein accession | YP_001433557 |
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| Protein GI | 156743428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.261998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAG GCGAGCAAGT CATCCGTGAT CGCTACCGCG TGATCTACAC CGTCGATGAG
CGTCCCGGCG TGAAAATCTA TCGTTGCCGC GATGATCAGA GCGGTGAGTT GTTGCTGGTA
GCCGGGTTTG CGCCGCCCGA AGGGGCGCTC AGCGATCTGG ACATTCTTGC AAAGCAGATC
GCGGCGGTGC GCCACGAGGC ACTGTTGCCG CTACGCGACC ATTTTGCCGA GGGTGCGCTC
TACTACATGG TTTGCGCCGA TCCCGGCGGG CAGGATGTTG AACGAGCGAT ACGCGCGCGC
GGCGGTCCGC TGCCGGAAAC CGACGTGCTG ACGCAGGCGA CCCGATTGCT CTTGCTGCTG
GAACATCTGC ACAACCAGCG TCCGCCGTTG TTTCTGGGCG ATCTGGCGGT TGTCGATGTT
TGGGTCAACG ACAAAGGCTC CTTTCTGATT ACTCCCTTTA CATTAGCGAC GCCAATCGGT
CAGTCGCCGT CGCCGTACCG CGCGCCTGAA CTCTCGCGCC CCGATGCAGA GCCTACAACG
GTGAGCGATG TGTATACCAT CGGCGCGCTG ATGTACCACG CACTGACCGG CTGGGCGCCG
CCGACGCCCG CGCAACAGGA AGCCGGGATG CCGCTGGCGG GTCCGCGATC GCTCAATCCG
CACATCTCGC CGCTGGTCGA GCAGGTGTTG CTGCGCGCTC TGCAATTGCG CCCGGTCAAT
CGGTTTCAGC AGGCGCGCGA AATGCGCATT GCGCTCGAAA CCGCGCAGAT GATGGGCGGA
CGTTCGCTTG GTCTTGGTCC TGATGTGCTG ACGCACGCAA CGCCATCCCC TCCTTATGAA
GAACAGCCGC AGCAAACGGC AGAGAATGTC GTGCATGCGG CACCGGGCAT TGCGCCGCCC
GCGGCGCCAG CGCCTGTTCC CGTGGCTTCG GTTGCTCCAC CGCCTGCAGC GCCGGCGCCC
TATCCGCCGC CAGGGTATCC AACCGGCTAT GCGCCTGCTC CCCCACGGCA GGGTTTGAGC
ACCGGCTGTC TCGTCACTTC TGCGGTGCTG CTGACCGTTG CTGCGATTGG GGTCTGTCTG
GCGATTGCGG TCTTTCTGCC GGGCAGTCCG CTGCGCCAGA TGCTCGGCAT GAGCGGCGCC
GCCGCTGCGC CAACATTGGC GCCAACGGAA GCGTCACCCG CAGCAACGGT GGCGCCGACT
GCAACGAGCG CTGCGAACGT GGAACCGACC GTCCCGCCCC CTACGCCAAT ACCTGCCAAT
GGATCATCTG CGCCTGGACC GGATGCTATC TCGCCACAGA ATGTCACGGC CATCACAGCA
ACACGCCAGC TGTCCATGTC GGTATTTGGT CCTGTCGCTT ACTCGCCTGA TGGACGGCTG
CTCGCCGTGG GGATAAGCGA AGCGGTCAGC CTGCATGATG CTACAACGCT CGATGACCTT
GGAACCTGGT TTGACCACAC GGGCAAAATC ACATCACTCG CCTGGTCTGC CGACAGCACC
TTGCTGGCGT CGGGCGCCAG CGACGATAAC GAAATTCGCA TATGGGACGT ATCGACCGGA
CGGGTGGTTC GGCGTCTGAG CGGTCATACC GGCTGGATTC GCAGCATCGC CTTCGCTCCC
AATGGCACGC TGCTAGCATC GGGGAGCACC GATCAAACAG TGCGTATATG GGATGCCGCA
ACCGGTCAAC TGCTGGCGAC CCTGAGCGGA CACACCGGCT TCATTGGCGG TGTGGTCTTT
TCCCCTGACA GCACGACGCT GGCATCCGCC TCGCGTGATG GCAGCGTGCG CCTCTGGGAC
GTGGCATCCG GGCGTGAAAT CAGTGGCTTC AATTTTCGCA CTCCGCTCGA CCCGGACACC
AACCTGCGCT ACTGGGCGAC CGGTGTCGCG TTTTCGCCTG ACGGCAAGGC GCTGGCAGTC
GGATCGACCG AGGGGGTCGT CTATCTGCTC GATGCCGCCA CCGGTCAGGT CATTCATCAG
TTGCGCGGTC ATACGAACTG GATCGTCATT CGCGGACTGG CGTTCGCTCC TGATGGAAAG
ACCCTCTACT CAGCCGGGCT GGACGCAACT GTGCGCATAT GGGATGTGGA ACGCGGCGTG
CAGACCGGTG TACTCGATGT TCACCGTCTC GACATTTTCA GCATTGCTAT CAGTCCGAAT
GGTGAGCGCC TGGCGTCGGT CAGCGATCAG GAAGGGCGCA TGATCGTCTG GGACCTGACA
CAGCAGCGCC CCGACATGAA CCTGCGGATC GGGCTGGGAT TGGTAACCTC GCTCGTCTTC
TCACCCGATA GTGAGGTACT TGGCGCCGTC GGGTACAATG GCATCATTCA GTTGCGGTTG
CTGGCGAATG ATCAAATCCG TCAGTTTGCA GGCTCTTCCA CGTCGGTGCA ATCACTGGCA
TTCCTGCCCA ATGGTCGTCT GGCAACGATT ACCGAGCAGG ATACGGTGGT TATCCTGGAT
TTTCTGCGCG AAACATCCAG CGATCTGACC GGATCGACCG GCGATCCGCT CTGCATTGCT
GCCGATCCGG GTGGAAAAGT GGTTGCCGCC GGCGCAAACG ATGGCACGGT GGCGATCTGG
AATGGCGCCG ATGGTCAGTT CCTCCGGTCG CTCAAGACCG ATCTCCCGGC GGTGTTTCTG
GTGGCGGTCA GCGATGATGG GGCATTCGTG GCTGCTGCCG GCACGCCGAA TGATCCACGC
ATCGAAATCT GGCGTGTCGC CGATGGGCAG CGCGTCCAGA CGTTGAGCGG CATGCAAAAC
TCCATCACCA GCATTGCGTT CCAACCGAGA GGGACGTTGT TTGCAGCAAC GGGGACCGAT
GGTGTGCTGC GTATGTGGAA TTATCGCACG GGCGCTTCGG AGCGAAATAT TAAGGCTGCG
CCGGAAAATG GTTGGTTTAC TGCACTGGCA TTCTCTCCCG ATGGCGCAAT CCTTGCGACC
GGCACACCCA CCGGCGTGGT GCAGTTCTGG AATCCGGCGA ACGGCGCAGA GATGGCGCAG
GTTCAGCAGC AATTCGGCGT GCTGGCGCTG ACGTTCAGCC CTGATGGCGC ACAACTCGCC
GCCGCCGGTC GTGATGCGGG CGTGACGCTT TATCGGGCTG TGCGCAGTGG TTCATCGTAG
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| Protein sequence | MSSGEQVIRD RYRVIYTVDE RPGVKIYRCR DDQSGELLLV AGFAPPEGAL SDLDILAKQI
AAVRHEALLP LRDHFAEGAL YYMVCADPGG QDVERAIRAR GGPLPETDVL TQATRLLLLL
EHLHNQRPPL FLGDLAVVDV WVNDKGSFLI TPFTLATPIG QSPSPYRAPE LSRPDAEPTT
VSDVYTIGAL MYHALTGWAP PTPAQQEAGM PLAGPRSLNP HISPLVEQVL LRALQLRPVN
RFQQAREMRI ALETAQMMGG RSLGLGPDVL THATPSPPYE EQPQQTAENV VHAAPGIAPP
AAPAPVPVAS VAPPPAAPAP YPPPGYPTGY APAPPRQGLS TGCLVTSAVL LTVAAIGVCL
AIAVFLPGSP LRQMLGMSGA AAAPTLAPTE ASPAATVAPT ATSAANVEPT VPPPTPIPAN
GSSAPGPDAI SPQNVTAITA TRQLSMSVFG PVAYSPDGRL LAVGISEAVS LHDATTLDDL
GTWFDHTGKI TSLAWSADST LLASGASDDN EIRIWDVSTG RVVRRLSGHT GWIRSIAFAP
NGTLLASGST DQTVRIWDAA TGQLLATLSG HTGFIGGVVF SPDSTTLASA SRDGSVRLWD
VASGREISGF NFRTPLDPDT NLRYWATGVA FSPDGKALAV GSTEGVVYLL DAATGQVIHQ
LRGHTNWIVI RGLAFAPDGK TLYSAGLDAT VRIWDVERGV QTGVLDVHRL DIFSIAISPN
GERLASVSDQ EGRMIVWDLT QQRPDMNLRI GLGLVTSLVF SPDSEVLGAV GYNGIIQLRL
LANDQIRQFA GSSTSVQSLA FLPNGRLATI TEQDTVVILD FLRETSSDLT GSTGDPLCIA
ADPGGKVVAA GANDGTVAIW NGADGQFLRS LKTDLPAVFL VAVSDDGAFV AAAGTPNDPR
IEIWRVADGQ RVQTLSGMQN SITSIAFQPR GTLFAATGTD GVLRMWNYRT GASERNIKAA
PENGWFTALA FSPDGAILAT GTPTGVVQFW NPANGAEMAQ VQQQFGVLAL TFSPDGAQLA
AAGRDAGVTL YRAVRSGSS
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