| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3484 |
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| Symbol | |
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| ID | 5540983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4546735 |
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| End bp | 4548054 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895602 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433552 |
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| Protein GI | 156743423 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.405275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCT CACGACGCAA CTTTGTAGTC GGGTGCAGCG CAGCAATTGC CGCGCTGACC
GGCGGCGCCG TCCGCGGTCT GGCATTTGCG CAGCCGGGAG ATACAACCCA CCGCGATATT
CTGGTGGTCG TTTTCCTGCG CGGAGGGTGC GACGGTCTCA GCCTAGTCGC GCCGGTGAAC
GATCCGTTCT ACCGTGGAGC GCGTGGCGAT CTGCGGGTCG AGGAAAGCGG ACAGAACGCC
GGGCTGCGCT TCGGCAACCC GATCCCGGGA GCCGATTTTC GCCTGCACCC ACGCGCCACG
CCGCTGCTGT CGCTCTATAT TAATCGCTCG CTGGCGATTG TGCATGCATG TGGACTGAGA
AATGGCACTC GCAGCCACTT CGAAGCGATG GACTATATGG AAGGCGGGAT TCCAGAGAGC
GGTGTTCCAG CCAATGGCTG GCTCGCGCGC TACCTGAACG GCATCAACGC CAGCGGTTAC
TTGCCAGCAG TCTCAGCCAG CGCGCGCATT CCATTCTCGA TGACCGGGTT CAACGACGCG
GCGGCGCTAA CCGATCCGGG CGCATTCAAC CTGAGCTGGA ACTCATGGCG CTACCGCTCA
CAACTCGACC AGGCGCTCGA CTCGTTCTAC TCCGGCGACT CGCCTGTGCA GCGGGCAGGA
CGCACCACGC TGACGACGAT TGCCCGGATC AATGAACGCC TGCCGCGCGA TTCACAAGGC
AGGGTTATCC CCTACACGCC GGAGAACGGC GCCGTTTATC CGGGAGGGCG CGGCGCCAGC
CTGGGCAGTG CCCTGCGCAC CGTCGCCGGT TTGATTAAAA TGGATGTCGG GCTGATCGCA
GCAACCGTCG ACTATGGCGG ATGGGACACG CATGAAGGGC AGAGCTGGAT CTTTCCCGAA
CTGGTTGCCG GGCTTTCTGA GGCGCTCTAT GCCTTCTACA ACGATCTCTG GCGCTATCAC
CACCGGCTGA CGATTGTGGT GATGAGCGAG TTTGGGCGGC GGCTCAAAGC CAACCGCAGC
AGCGGCACCG ACCACGGGCA TGGCAATGTG ATGCTGGCGC TTGGCGAAGG AATCCGTGGC
GGGAAGATGT ACGGCGTTTG GCCCGGACTG GCAACTGAGC AACTCGACAA TGGCGTTGAT
CTGGCGATCA CTACTGACTA TCGCGCGGTG CTGTCAGAAA TCCTGGTCAA GCGTGGCGGA
CACCAGGCGG TCGATCAGGT GTTTCCCGGT TTCAGCGGCT CACCGCTCGG TCTCGCCTAT
GCTCCCGGCG AGACGATTGA ACGACCACAG CGGGTGAACC TGCCACTGGT GACGCGCTGA
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| Protein sequence | MTLSRRNFVV GCSAAIAALT GGAVRGLAFA QPGDTTHRDI LVVVFLRGGC DGLSLVAPVN
DPFYRGARGD LRVEESGQNA GLRFGNPIPG ADFRLHPRAT PLLSLYINRS LAIVHACGLR
NGTRSHFEAM DYMEGGIPES GVPANGWLAR YLNGINASGY LPAVSASARI PFSMTGFNDA
AALTDPGAFN LSWNSWRYRS QLDQALDSFY SGDSPVQRAG RTTLTTIARI NERLPRDSQG
RVIPYTPENG AVYPGGRGAS LGSALRTVAG LIKMDVGLIA ATVDYGGWDT HEGQSWIFPE
LVAGLSEALY AFYNDLWRYH HRLTIVVMSE FGRRLKANRS SGTDHGHGNV MLALGEGIRG
GKMYGVWPGL ATEQLDNGVD LAITTDYRAV LSEILVKRGG HQAVDQVFPG FSGSPLGLAY
APGETIERPQ RVNLPLVTR
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