Gene Rcas_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3482 
Symbol 
ID5540981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4544036 
End bp4544425 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content62% 
IMG OID640895600 
Producthypothetical protein 
Protein accessionYP_001433550 
Protein GI156743421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.857066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.056251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCG TGCGGGGATG TAACCCTATT TCGTGCTTTA TCAGCGCGCT GCTCTTTGTC 
CTGATCGGCG CCTGTGTTGG CGGTGTGTTC TTTGTCGTGA TACGTTCTAT CCGCGACTCA
GATGTTGTGC AGGAAGCGCT GGTGCGCGCT GAGCGCGATC CGCAGGTGGC GGCGGCGCTC
GGCGCGCCGC TTGAGGCGGG TTGGTTTCCT ATGGGTTCTA TAAGCACCGG TGATGGCAGC
GGTAACGCCA ATCTTACGCT CTCGGTCGCA GGACCGCGCG GGTCGGGCGA GATGATGATC
GAAGCCGTGC ACCGTGAGGG CGTGTGGCAG TATCGTCGCC TGATCGTCAC CGTCGGCGGC
AGACAAATCG ATGTGTTGCG CGAGCAGTAG
 
Protein sequence
MVSVRGCNPI SCFISALLFV LIGACVGGVF FVVIRSIRDS DVVQEALVRA ERDPQVAAAL 
GAPLEAGWFP MGSISTGDGS GNANLTLSVA GPRGSGEMMI EAVHREGVWQ YRRLIVTVGG
RQIDVLREQ