| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3472 |
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| Symbol | |
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| ID | 5540971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4532388 |
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| End bp | 4532888 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895590 |
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| Product | homoaconitate hydratase small subunit |
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| Protein accession | YP_001433540 |
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| Protein GI | 156743411 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0185812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGTA TCTGGCGTTT TGGCGCAAAT ATCAATACCG ATCAGATCGT CCCTGGGCGC
TATGCGCCGT ATATGCTCAA GAATGAGGAC GAATTGCGCA ACTATCCGTT CATTGAGGCG
CGTCCCGAGT TTGCTTCAAC CGTGCGCCCT GGCGACCTGA TCATCGCCGG TCCAAACTTC
GGGTGCGGTT CGTCGCGCGA ATATGCGCCG CTGGCGCTCA AGATGGTCGG CATCGGTGCG
ATCATCGCGC CGCTCTTCGC GCGCATTTTC TACCGCAACG CGCTCAACCT GGGTATTCCG
CTGTTCGAGG CGGACCTGAC CGATCAACTG GAAGACGGGC AGGAAGTGGA GTTCAACGCC
GAAACCGGCG TCATCGTCGC CGACGGTCGC GCAATTCAAC TGCCGCCGCC ACCCGAATGG
ATGCGTGAGG TCTGGCGCGA AGGCGGGATT GTGCCGTTCT ACCGCAAGCA TCGCCGCTTC
CCCGGAGTAG TGCCCGTATG A
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| Protein sequence | MARIWRFGAN INTDQIVPGR YAPYMLKNED ELRNYPFIEA RPEFASTVRP GDLIIAGPNF
GCGSSREYAP LALKMVGIGA IIAPLFARIF YRNALNLGIP LFEADLTDQL EDGQEVEFNA
ETGVIVADGR AIQLPPPPEW MREVWREGGI VPFYRKHRRF PGVVPV
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