| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3469 |
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| Symbol | |
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| ID | 5540968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4530266 |
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| End bp | 4531123 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895587 |
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| Product | lysine biosynthesis enzyme LysX |
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| Protein accession | YP_001433537 |
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| Protein GI | 156743408 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family
[TIGR02144] Lysine biosynthesis enzyme LysX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.072295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCG GCGTCCTCTG CTCGCGCATC CGCGTCGAGG AGAAACTGCT CTTTGCCGAA
CTGGAGCGAC GCGGCGTTGC CTATGAACGC ATCGACGACG ATGATGTCAT TTTCGACCTG
AACGAAGGTC GCTACGAGTA CGACGTCGTG CTCGAACGGA GCATCCACCA CTCACGCGCA
CTCTATGCCC TCAAGGTGTT CAACGATGCC GGCGTGCCGA CGGTCAATAC CGCCTATGTC
GCCGACATCT GCGGCGACAA ATTCAAGACT ACACAGGCGC TCATTCGCGC TGGCGTACCA
ACGCCGCGCA CCCGCATGGC GTTCACTCCC GAATCGGCAT TGCGCGCCAT TGAGGACCTG
GGTTATCCGG CGGTGCTCAA GCCCGCTATC GGCTCATGGG GGCGCCTGAT CGCCAAGGTC
AATGACCGTG AAGCGGCTGA GGCGCTGCTC GAGCACAAGC AGATTCTGGG ATCGTACCAC
CATTCGATCT TCTACATTCA GGAATATATT CCCAAACCAT ACCGCCGCGA CATTCGCGCC
TTCGTCGTTG GTGATGAGTG TATTTGCGCC ATCTACCGCA CCAGTGACCA CTGGATCACC
AACACCGCGC GCGGCGGGCA GGCAACCGTT TGTCCCGTGA CACCCGCGCT GGCGGACCTG
TGCGTCAGCG CAGCATACGC CGTCGGCGGC GGCGTGGTCG CCATCGATGT GCTGGAAGCG
CCCGACGGCA GGCTGCTGGT GAACGAAGTC AACTATACAA TGGAGTTCCG CAACAGCATC
GCGCCGACCG GTGTGGACAT TCCGGCGCGC ATCATTGATT ACACCCTGGA TGTCGCGCGG
AAGGGGAGCG TCTCATGA
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| Protein sequence | MRVGVLCSRI RVEEKLLFAE LERRGVAYER IDDDDVIFDL NEGRYEYDVV LERSIHHSRA
LYALKVFNDA GVPTVNTAYV ADICGDKFKT TQALIRAGVP TPRTRMAFTP ESALRAIEDL
GYPAVLKPAI GSWGRLIAKV NDREAAEALL EHKQILGSYH HSIFYIQEYI PKPYRRDIRA
FVVGDECICA IYRTSDHWIT NTARGGQATV CPVTPALADL CVSAAYAVGG GVVAIDVLEA
PDGRLLVNEV NYTMEFRNSI APTGVDIPAR IIDYTLDVAR KGSVS
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