| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3457 |
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| Symbol | |
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| ID | 5540956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4516408 |
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| End bp | 4517205 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895575 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001433525 |
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| Protein GI | 156743396 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0252866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAGC CCATGACCGA TCATAGTGCC GAAGCGCTTC CGCCCGAAGT GCGGCGCGAC
CAGATCATGG CGCTGCTTCA GCGCCACGGG CAGATCTCGG TCAAATGGTG CGCCGAACAG
TTGGGCGTCT CCGAGGTGAC GATTCGCAGC GATTTTGCGC TGCTCGAACG GGAGGGCATG
CTGCGGCGCA TATGGGGCGG CGCCGTGCTC GACCGGCCAT TGTGGCCGGA GGGGAGTTTT
GCCTCGCGTC TGAAGGTGCG CGTGGAAGAA AAGGAGCGCA TCGCGCGCGC TGCGGCGCGC
CTGATCAACG ACGGTGATAC GGTCATGCTC GACGCCAGTA CGACCGCCTA TGCCATTGCC
CGGCAGATCG CCGACCGGCG CAACCTCACC GTCATCACCA ACGGCATGCA CCTTGCCCTG
TCGCTTGGCG CTCATCCTTC CATCACCACG ATTGTTATCG GTGGTCAGGT GCGCGGTGAC
ACTGGTTCGC TGACCGGCAC GCTGGCGGAG GAGATGTTGC AGCGTCTGCA CGCCGACAAA
GGGTTTTTCT CGGCGCGTGG ATTGACCCTG GCAAAGGGAC TGACCGAAAG TTCCATCCCG
GAAGGATTGC TCAAGGCGGC GATGGTGCGT CACGTTGATC AAGTCATTGC CGTGCTCGAC
AGCAGCAAAC TAGGGGTCAG TTCACTGACG AGTTTCTGCC CGGTCGAGGC GATCCACCGA
CTGATCACGG CTGGAGCGGA TGCTGCTGAA CGGAGCGCTC CGTTCGGCGA TCTCTTTCCT
GTAATGATTG CGGGGTAA
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| Protein sequence | MHKPMTDHSA EALPPEVRRD QIMALLQRHG QISVKWCAEQ LGVSEVTIRS DFALLEREGM
LRRIWGGAVL DRPLWPEGSF ASRLKVRVEE KERIARAAAR LINDGDTVML DASTTAYAIA
RQIADRRNLT VITNGMHLAL SLGAHPSITT IVIGGQVRGD TGSLTGTLAE EMLQRLHADK
GFFSARGLTL AKGLTESSIP EGLLKAAMVR HVDQVIAVLD SSKLGVSSLT SFCPVEAIHR
LITAGADAAE RSAPFGDLFP VMIAG
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