Gene Rcas_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3451 
Symbol 
ID5540950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4508337 
End bp4508891 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID640895569 
Producthypothetical protein 
Protein accessionYP_001433519 
Protein GI156743390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.320448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGTC TCATCCTGCA ACGCAATCGC CTGACCTTGC TGACCTTCGT GGTCATCCCC 
GCCGCCATCG CGGCGATAGC GGCGGCGTGG CTGCTTCGTC CGCAGGCGAC GAGCGGGTCG
CCCCTCGGCG ACCCGAACGC GCCGGTCGTC GCCGCGACGC CCGCCCCGTT CGTCGGCGGA
CAGCCGCCGA TCGCGCGCCC CGCCGCCGTG CCGGTCGCGG CGTCCCGCGC CGATGGCGGC
CCCCCGCCGG ACGCTCCCGC CAACTTCATC GAGGCGCGCA TGCCCGACGC GCGTTATCAC
GACGCGGCGT TCGCCGCCGT GCAGTGCGCC GTCGGACGCC CCTTGACGCG CGACCCGGCG
CTCGACGCCC TCGCCGTCGA AGCCTGGCGC GCAAAGATGA TGTATGGACA TGAGCGCGTC
GAGGCTATGA ACTGGCACAG ACACAACCGG CTTTTCACGT TCGCCATGTC ATCGCCGCAA
ACTGGAAGAT TGTCGCCGAG AACTTTTTCG CGTGTTATCA TTGCAGTCAC ACCCACCCGG
AGTTCTGCTC AGTGA
 
Protein sequence
MVRLILQRNR LTLLTFVVIP AAIAAIAAAW LLRPQATSGS PLGDPNAPVV AATPAPFVGG 
QPPIARPAAV PVAASRADGG PPPDAPANFI EARMPDARYH DAAFAAVQCA VGRPLTRDPA
LDALAVEAWR AKMMYGHERV EAMNWHRHNR LFTFAMSSPQ TGRLSPRTFS RVIIAVTPTR
SSAQ