Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3447 |
Symbol | |
ID | 5540946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4503478 |
End bp | 4504242 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895565 |
Product | RDD domain-containing protein |
Protein accession | YP_001433515 |
Protein GI | 156743386 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.492648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCCG GCGACTATAT TGTTGAGACT CCAGAGCAGA TCGAACTGGC ATACGATCTT GCCGGGATCG GTTCGCGGTT TCTGGCAGCA ATTGTTGATA GCGCGCTGAT CGCTCTTGCT GAATCGGCGC TCTTCTTCGC GCTGGCGCAG ATCGCCGGCG CAATGGAGTT CGCCGAAAGT GTGCTTATCG CCATTGGCGC GGCGCTCGGG TTTGCCATTC TGTGGGGATA CTACATCGCT TTTGAGTTGA CATGGAATGG GCAAAGCCCC GGAAAACGCC TGATCGGGCT GCGCGTCGTT TCGGAAGGCG GACGCCCGAT AACGGTCACC GGTTCGATCA TTCGCAACCT GATCAGGATT GTGGACTTCC TGCCATTTCT GTATGGCATC GGAGTGATTG CGATGTTTAT CGATGGACAG GCGCGGCGGC TGGGCGATCT TGCCGCCGGC ACGCTGGTGG TGCGCGAGCG CGCCGATGTG ACGCTCGAAG GTCTCGTTAC ACGTGCTGCG CCGGACATGC CGCCGCCGTC CGGCGATACG ACTGATCTGA TCGATGTCAG TCTGCTGACA CCCAACGATT ATGCGCTGCT GTGCGACTTT CTCGATCAGC GACGCGACCT GGCGCAGCCG GTGCGTCGGC GCCTGGCGGC GCAACTCGGC GAAGGATTGC AGGCGCGGCT GGGTGTGTTG CCTGAAAGTG ATCCAGAGCG CCTGATCGAA CGTGTGGCGC GCGCGTATCA GTATCAGCGA CGCCGGGGAT CATAG
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Protein sequence | MVSGDYIVET PEQIELAYDL AGIGSRFLAA IVDSALIALA ESALFFALAQ IAGAMEFAES VLIAIGAALG FAILWGYYIA FELTWNGQSP GKRLIGLRVV SEGGRPITVT GSIIRNLIRI VDFLPFLYGI GVIAMFIDGQ ARRLGDLAAG TLVVRERADV TLEGLVTRAA PDMPPPSGDT TDLIDVSLLT PNDYALLCDF LDQRRDLAQP VRRRLAAQLG EGLQARLGVL PESDPERLIE RVARAYQYQR RRGS
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