Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3445 |
Symbol | |
ID | 5540944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4499248 |
End bp | 4499919 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895563 |
Product | phosphoglycerate mutase |
Protein accession | YP_001433513 |
Protein GI | 156743384 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0141958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT TCTACATCAT CCGGCATGGT CAGACCGATT GGAATCTCCA GGGACGCTGG CAGGGCAAGG CGGATATTCC GCTCAATGAA GCAGGACGTG CGCAGGCGCG GAGTCTGGCG GGGCATCTTG ATCGCCGACG CATCTGTTTC GATGCCATCT ATAGCAGCGA TCTGCTGCGA GCATGGGAGA CTGCAACGCT GATCGCGGAC AGGTTGAACG TTGAACCTAC GCCGCTGCCG GCGCTGCGCG AGATTGACGT TGGCGCGTGG AGCGGGCTGA CCCGCGATGA GGTCGTGGCT CGATTTCACG ATCTGTGGGA ACGGTTGCAC TCGGGTGAGG ATGTGCCGCG TGGCGGCAAT GGTGAAACCT TCGGGCAACT CTATGACCGT GTCGTTGGCG CGGTTGAACG ATTGATACGC GAGCAACCAG GACAAACCAT CGCCCTGGTG ACGCACGGTG GTCCGGCACG CGCGTTGCTG CTCCATGCGG CGCGCGATAA GGTCGGCGTG TTGCCGCGCC CATTGCACAT CAGCAATACA TCGTTGTCGG TTGTAGCGTG CACAGCAAAC GATTGGCGCA TCCTCGCAGT GAACGACACG TCGCACCTCG ACAGCGCACG TGAAGCGCCT GATATGATGG AGACGCAAGT CGATGATGCG GAGCGGGCAT GA
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Protein sequence | MTTFYIIRHG QTDWNLQGRW QGKADIPLNE AGRAQARSLA GHLDRRRICF DAIYSSDLLR AWETATLIAD RLNVEPTPLP ALREIDVGAW SGLTRDEVVA RFHDLWERLH SGEDVPRGGN GETFGQLYDR VVGAVERLIR EQPGQTIALV THGGPARALL LHAARDKVGV LPRPLHISNT SLSVVACTAN DWRILAVNDT SHLDSAREAP DMMETQVDDA ERA
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