Gene Rcas_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3440 
Symbol 
ID5540939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4490680 
End bp4491612 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID640895558 
Productaminoglycoside/hydroxyurea antibiotic resistance kinase 
Protein accessionYP_001433508 
Protein GI156743379 
COG category[V] Defense mechanisms 
COG ID[COG3570] Streptomycin 6-kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.625918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0646314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCGA TCAACGTGCA TTCGTCACAT CTTGCTGCCT TCAGGCGCGC CATCATCGAA 
CTCTACGGCG AGGCGGGCAG CATATGGCTG GCACAGTTGC CATCGCTCCT CGAAATCCTT
GCAGAGTCCT GGTCGTTGAC CATTCTGCCG CCCTTCCCCA ACCTGACGTA CCATTACGTT
GCGCCGGCAA TCCGAGACCA CGACGAGCCG GTGATTCTGA AGGTTGGCGT CCCGAACCCG
GAGTTGACCG CAGAGATTGA GGTCCTCCGG TGGTACGACG GGCGCGGCTG CGCCCGATTG
ATCGCAACCG ATGAAGCGCG CGGCGCACTG CTGATTGAGC GCCTGCTGCC AGGAACGCCA
TTACGTGATC TTGAACCGGA TGACAGCACG ATCCTCATCG CTGCTGAGAT TATGCGACAC
ATCTGGCGCC CGGCGCCCGC CGAACATCCA TTCCCGACAA CTACGGCATG GGGCAAAGGG
TTTGTGCGTA TGCGCCGCGC CTTCGACGGC GGCAGCGGTC CGTTTCCGTC GGCGCTGACG
GACGCAGCGG AGCGGTTGTA CGCCGAACTC GACGCCTCGA GCGCCTCATC GGTGGTACTG
CACGGTGATC TCCATCAGGA GAATGTGCTG ACGGCGCAAC GCGCCCCCTG GCTGGCAATC
GACCCGAAAG GCGTGGTTGG CGAACCGGCA TATGAGGTGG GAGCGCTGCT GCGCAACCCG
CCGTCCTGGC GCACACCGGC TGAACTTGAG CGTCTTATGG CGCGGCGGAT CGATCTGCTC
GCAGAAACGC TCGGTTTCGA GCGCGAGCGG ATCGCCGGCT GGGGCCTGGC GCAGGCTGTC
CTGTCCGCCT GGTGGTCGTA TGAAGATCAT GGGCATGGCT GGGATGAAGC GATTGCGTGC
GCCGAAGCGC TCTATCGCTG GAGTCTGCTA TGA
 
Protein sequence
MVSINVHSSH LAAFRRAIIE LYGEAGSIWL AQLPSLLEIL AESWSLTILP PFPNLTYHYV 
APAIRDHDEP VILKVGVPNP ELTAEIEVLR WYDGRGCARL IATDEARGAL LIERLLPGTP
LRDLEPDDST ILIAAEIMRH IWRPAPAEHP FPTTTAWGKG FVRMRRAFDG GSGPFPSALT
DAAERLYAEL DASSASSVVL HGDLHQENVL TAQRAPWLAI DPKGVVGEPA YEVGALLRNP
PSWRTPAELE RLMARRIDLL AETLGFERER IAGWGLAQAV LSAWWSYEDH GHGWDEAIAC
AEALYRWSLL