| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3439 |
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| Symbol | |
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| ID | 5540938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4488170 |
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| End bp | 4490680 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895557 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001433507 |
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| Protein GI | 156743378 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.105513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAG AATCGCCGAT ACTCTTCGAC TTCCCGATCA ACCCGGAGTC TGCGCTGATC
GACGGCCAGG GGCAGGAGCG TATCCTCCCG GTTGTGCCGT TGATCAATAC CGTGTTATTT
CCGCATATGC TCACGCCTCT CTTCGTTGGG CGCGAGCGAT CCGTGGCGGC CATCGAGGAG
GCGATGAGTG GAGATCGCAC AATTCTGGCA GTTGCACAGC GCGAACCGGA TATCGAAGAC
GTCGGACCCG CCGATCTGTA CGCCGTTGGC GTCGAGGCGG TAATTCAGCG GATTCTCAAG
ATGCCTGACG GTTCGATCTC AATCGTCGTC CAGGGGCAAC GGCGCATGCG CGTTGTGGCA
TATGTGCAGG ATCGTCAGGT GCTGCACGCG CAGAGCATCG CCATTTACGA GAACACCGAA
AAGACGATCG CCGTCGAAGC CATGATGCGC GCAGTGCTCT CATTGTTCGA GAAAGTCGTC
AAACTGTCGC GCACCCTGCC CGACGATGCC TATATTATGG CGATGAATGT CAGCGAACCG
GGATGGCTGG CGGACCTGAT CGTCTCGACA TTGCCGCTCG ATGTGCCGCG CCGCCAGGAG
ATATTGGAGA CGCTCGACGT TGAGGAACGG CTGCGTCGCC TGTCGATCAT GCTCTCGCAG
GAGCTTGATG TCCTCGAACT CGAAAGTCGC ATTCACACCC AGGTTCAGAA GGAAGTCGAC
CGGTCGCAGC GCGAGTTCTT CCTGCGCGAA CAGATGAAAG CCATTCAACG CGAATTGGGG
CAGACCGACC CGATCCAGCG CGAGATGGAC GAACTGCGTG AGCGGATCCT GGCGGCGGCA
ATGCCTGAAC GCGCGCAGGC AAAGGCGCTC GAAGAACTGG AGCGCATGGA GATGATGCCG
CCAGCCTCGC CTGAATACAG CGTGCTGCGC ACCTACCTCG ACTGGCTGAT CCATTTGCCC
TGGAGTCAGC AGACCGAAGA CGATACCGAC CTGGTGCGCG CAGCCGCGAC GCTCGAACGC
AACCACTATG GTTTACCGCG CGTCAAGGAG CGCATTCTGG AGTTTATGGC AGCGCGGATG
CTCGCCGGTT CGCGGCTCAA GTCGCCGATC ATCTGTTTTG TCGGTCCTCC GGGTGTGGGA
AAAACCTCAC TCGGTCGCTC GATTGCCGAA GCACTGGGGC GACGCTTTGT GCGCATTTCG
CTGGGAGGCG TCCACGACGA GGCGGAGATT CGCGGACACC GGCGCACCTA TATCGGCGCA
ATGCCAGGGC GGATCGTCAA GGCGATGAAA GATGCCGGAA CCATCAATCC GGTCTTTATG
CTCGATGAGA TCGATAAATT GGGCAGCGAT TTTCGCGGCG ATCCGGCATC GGCGCTGCTG
GAAGTCCTCG ACCCGGAGCA AAATGTCGCG TTTACCGACC ATTACCTCGA TCTGCCGTAT
GACCTGTCGC GCGTGCTCTT TATTACGACC GCCAACCTGC TTGATCCGAT TCCGCCAGCG
CTGCGCGATC GCATGGAAGT GATCCATTTG CCAGGATATA CCGAGGAGGA GAAACTGGAA
ATTGCGCGCC GATTTTTAGT TCCGCGGCAA CTGGAGGCGA ACGGTCTTGC AAGCCCGGAG
TACGTCGCGC AGAGCGCCAT AGCCCTGATG AAGGACCCGG TGGCATTATC GAAGATGCCC
GGAACGGTGT TGCGCTTCAG CGACAGTGCG CTGCGTCAGA TCATCCGGGG GTATACGTAT
GAAGCGGGGG TGCGCAACCT CGAACGCGAA ATTGGCGCGA TCTGCCGCAA GGTAGCACGG
CGCCTGGCGG AAGGTCGCAA TTATGCCCAT ATTATTCAGG CGTCTGCGCT CAACCGTTAT
CTGGGTCCCC CGCGCTACCT CTACGGTCTT GCCGAGCAAC AGGACGAGGT AGGAGTGGCA
ACCGGCATGA GCTGGACTGC CAACGGCGGC GATGTGATGG CCGTCGAGGT TTCACTAATG
AAGGGACGCG GGGTGTTGTC GCTGACCGGA CAACTCGGCG AGGTGATGCG CGAGTCGGCG
CAGGCGGCGC TCTCGTTTGC GCGCGCCAAT GCCGAAGCGC TCGGCATCAA GCCCAAACGT
TTTGAGACGA CTGATATTCA CATTCATGTG CCGGTCGGCG CGGTTCCCAA GGATGGTCCG
TCTGCCGGAA TTACGATGGC AACGGCGCTG ATTTCGGCGT TTACCGGTCG ACCGGTGCGC
CGCGATGTGG CGATGACCGG CGAAATCACC CTTCGCGGAC GGGTATTGCC GGTCGGCGGG
ATCAAGGAAA AGGTGCTTGG CGCTCACCGC GCTGGCATTC TCACCATTAT TCTGCCACGA
CGCAACGCCG TGGATCTCGA AGAAGTTCCG GCGCACGTGA AACGCCGGTT GAACTTCGTC
TATGTCGATC ATATGATGGA AGTCATCGCC TGCGCGCTGT GTGAGCATGG CGACAGGCGC
GTGTCCGCCG CGTCCACCGA GGGAACACCG GTCAACGGAT CACAACCCTG A
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| Protein sequence | MPEESPILFD FPINPESALI DGQGQERILP VVPLINTVLF PHMLTPLFVG RERSVAAIEE
AMSGDRTILA VAQREPDIED VGPADLYAVG VEAVIQRILK MPDGSISIVV QGQRRMRVVA
YVQDRQVLHA QSIAIYENTE KTIAVEAMMR AVLSLFEKVV KLSRTLPDDA YIMAMNVSEP
GWLADLIVST LPLDVPRRQE ILETLDVEER LRRLSIMLSQ ELDVLELESR IHTQVQKEVD
RSQREFFLRE QMKAIQRELG QTDPIQREMD ELRERILAAA MPERAQAKAL EELERMEMMP
PASPEYSVLR TYLDWLIHLP WSQQTEDDTD LVRAAATLER NHYGLPRVKE RILEFMAARM
LAGSRLKSPI ICFVGPPGVG KTSLGRSIAE ALGRRFVRIS LGGVHDEAEI RGHRRTYIGA
MPGRIVKAMK DAGTINPVFM LDEIDKLGSD FRGDPASALL EVLDPEQNVA FTDHYLDLPY
DLSRVLFITT ANLLDPIPPA LRDRMEVIHL PGYTEEEKLE IARRFLVPRQ LEANGLASPE
YVAQSAIALM KDPVALSKMP GTVLRFSDSA LRQIIRGYTY EAGVRNLERE IGAICRKVAR
RLAEGRNYAH IIQASALNRY LGPPRYLYGL AEQQDEVGVA TGMSWTANGG DVMAVEVSLM
KGRGVLSLTG QLGEVMRESA QAALSFARAN AEALGIKPKR FETTDIHIHV PVGAVPKDGP
SAGITMATAL ISAFTGRPVR RDVAMTGEIT LRGRVLPVGG IKEKVLGAHR AGILTIILPR
RNAVDLEEVP AHVKRRLNFV YVDHMMEVIA CALCEHGDRR VSAASTEGTP VNGSQP
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