| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3436 |
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| Symbol | |
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| ID | 5540935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4484124 |
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| End bp | 4484957 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895554 |
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| Product | LmbE family protein |
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| Protein accession | YP_001433504 |
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| Protein GI | 156743375 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.550746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.108927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG AACGATTGCG TGTGCTCATC TTTGGCGCGC ATCCCGATGA TGTGGATTTC
ACGGCTGGAG GAACGGCGGC GCTCTATGCC CGTCAGGGGC ACGAGGTGCT CTGCGTCTCA
GTCACAAACG GCGATGCCGG GCATCAGACC GAAGCCGGAG CGTACCTGGC GCGCCGCCGC
CGCGCCGAAG CCGAGGCAGC CGGGCGCATC ATCGGTGTGC GGTATATCAC GCTTGATAAC
CACGACGGCG AACTGATGCC GACGCTCGAA AATCGCCGTC AGATCATTCG TCTGATCCGC
CAGTTCAAGC CCGACCTGAT CATGTCACCG CGCCCCAACG ATTACCATCC AGATCATCGC
TACACTGCAC AGTTGATCCA GGACGCTTCG TATATGGTGA CCGTTCCAAA TGTCTGCGCC
GATACGCCGC ACCTCGATGC AATGCCGGTG ATTGTATACG TCAGCGATAC GTTCCAGAAG
CCGTATCCTT TCACTGCCGA GGTGGTGGTT GCCATCGACG AAGTGATCGA CCTGAAGTTT
GCGATGCTGC ACGCGCACAC GTCGCAGATG TACGAGTGGT TACCGTACAA TCAGGGTGTT
CTGCACGAGG TGCCGGCAGG AGATGCCGAA CGCCTCGCCT GGCTGCGTCG TCGTCTCGAT
GGACGGATGC GGCAGGATGC CGACCGATTC CGCAGCCTGC TCATCGACCT GTACGGCGCT
GAACGCGGGC GCAGTGTCGT TTACGCCGAG GCATTCGAGG GGTGCGAATA TGGCACGCGG
CTGACGCCGG AGAACCTGCA CCGCCTCTTT CCGTTCTTCC CGGAGCGGCG CTGA
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| Protein sequence | MADERLRVLI FGAHPDDVDF TAGGTAALYA RQGHEVLCVS VTNGDAGHQT EAGAYLARRR
RAEAEAAGRI IGVRYITLDN HDGELMPTLE NRRQIIRLIR QFKPDLIMSP RPNDYHPDHR
YTAQLIQDAS YMVTVPNVCA DTPHLDAMPV IVYVSDTFQK PYPFTAEVVV AIDEVIDLKF
AMLHAHTSQM YEWLPYNQGV LHEVPAGDAE RLAWLRRRLD GRMRQDADRF RSLLIDLYGA
ERGRSVVYAE AFEGCEYGTR LTPENLHRLF PFFPERR
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