Gene Rcas_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3430 
Symbol 
ID5540929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4471569 
End bp4473641 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content61% 
IMG OID640895548 
Producthydroxylamine reductase 
Protein accessionYP_001433498 
Protein GI156743369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000818462 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCCCAT GGAAACACAT CGTCTTTGGC GCCATGCTGG GACTGGTCGT GCTGGTTGCG 
TGTGCGCGCC AGGCGGAGGT GTCGCCGGCG ACGGCGCCCA CGCCAATCCC ACAGGCGGCA
CCGGTGGTGG CCACGACTGC ACCGCCAGTC GATTGTGCGC TGGCGGCATT TCAGAAGGGA
GGCTGCGGCG CGTGCCACGT CATCCCTGGC GTCCCCAATG CCAGAGGAAC TATCGGACCG
GATCTCACCA ATGTCGCACA GGTTGCCGCT CAGACAATGC AGAGCAGCAC CTACACCGGC
AACGCGACGA CGGTTGAAGC GTACCTCCGC GAAGCCATTC TCGAACCGGA TGTATTCGTC
GCCCCCGATT GCAACGGCAG CCCATGCCAG AAGGGGGTCA TGCCGCCATC GCTGGGGCAG
GGATTGTCCG AAGAAGAACT AGCGGCAGTC ATCGCCTACC TGCAAGCGCC ACCCGGCGCA
GCGGAGGCAG TCGTCACCGA AGCGCCAACC GCTGCACCAT CGGAAGCCGC GCCGACCCTG
AGCGACGACG AGTTCGCCTG GGCGAAACTC GTCTACTTCG AGCGCTGCGC CGGATGCCAT
GGCACACTGC GCAAAGGCGC AACCGGTCCG GCGCTCACTC CCGACCGGAC CATTCCGCTT
GGCACCGTCG GGTTGTCAAC GATTATCTAC AATGGTACAT CGCGCGGGAT GCCCGATTGG
GGCAAGCAGG GCTTTTTCAC GAAGGAGCAG ATCGAAGTGC TGGCGCGTTT CTTGCAGCGC
GAGCCGCCAG CGCCGCCCGA ATTGCCAATG GAACGCATGA AAGCATCGTG GAAGATGTAC
GTCGCGCCGG ATCAACGACC AACTGCGCCA CAGACGAAGC GCAACTGGCA GAACTATTTC
GTTGTGACGC TGCGTGACGC CGGCCAAGTG GCGGTGATCG ACGGCGATAC GTATGAGGTG
GTCAGCAAAG TGGACAGCGG CTACGCGGTT CACATTACCC GCATGTCGGC AACCGGGCGC
TACGCCTATG TCATCGGGCG CGACGGGAAA CTGGCGATGA TCGATCTGTG GACGGAAACA
CCCGCAAAAG TCGCTGAAGT TCAGGTCTGC TACGACGCGC GTTCGGTCGA GGTCAGCAAG
TACAATGGTC CAGAGGGCGA TTTCACCGAT AAACTGGCAG TGGTTGGCTG TTACTGGCCT
CCGCACTTCG TCATTCTCGA TGGACAGACA CTGGAACCAA TCCATATCGT CAGCACCCGC
GGCTACACCG TCGATACGAT GGAGTACCAT CCAGAACCAC GTGTCGCCAG TATCGTCGCT
TCTGATTTCA AACCGGAATG GATCATCAAC GTCAAGGAAA TCGGGCAGAT CTGGCTGGTG
AATTACGCCA ATCCGCGGGC GCCGCAGATT AAGATGCTGC CGGCGGCGCG CTTCCTCCAT
GACGGCGGCT GGGATGCCAC CCATCGCTAC TTCCTGGTGG CAGCCAATCA GTCGAACAAG
GTTGCGGTCG TCGATGCACA GGAGGGTCGG ATGGTTGCGC TGGTGGACAC GCCGAAAATT
CCGCACCCCG GTCGCGGCGC CAACTGGGTC GATCCTGAGT TTGGTCCGGT CTGGAGTTCA
GGGCACCTTG GCGATCCGGC GATTGTTTCA ATCGGCACAG ATCCCGAAGG ACATCCCAAC
GTTGCCTGGA AAGCGGTGCG TGTCACACCG TTGCCCGGAG CAGGGAGCCT GTTCATCAAG
ACGCACCCAA ACAGTAAGTG GATTTGGGTA GATATGACGC TCAACTCCGA TCCGGCGCTG
GCGCGGACGA TCTGCGTCAT TGCGAAGGAG AATCCGGCAG AGCCGCATAC GTGCTGGGAA
GCCAGTTCCT ATGGGCGCGC TGTCCACTTC GAGTACAACG CAGCCGGCAC GGAGGTGTGG
GTAAGTATCT GGGGCGATGC GAGCAAACCG GGCGAAACGG GCGAAATCGT GGTCTACGAT
GACGCCACGC TGACCGAAAA GGCGCGCATT CCCAACCTTG TGACGCCAAC CGGTAAGTTC
AACGTGTACA ACACGGTGCA TGATATTTAC TGA
 
Protein sequence
MRPWKHIVFG AMLGLVVLVA CARQAEVSPA TAPTPIPQAA PVVATTAPPV DCALAAFQKG 
GCGACHVIPG VPNARGTIGP DLTNVAQVAA QTMQSSTYTG NATTVEAYLR EAILEPDVFV
APDCNGSPCQ KGVMPPSLGQ GLSEEELAAV IAYLQAPPGA AEAVVTEAPT AAPSEAAPTL
SDDEFAWAKL VYFERCAGCH GTLRKGATGP ALTPDRTIPL GTVGLSTIIY NGTSRGMPDW
GKQGFFTKEQ IEVLARFLQR EPPAPPELPM ERMKASWKMY VAPDQRPTAP QTKRNWQNYF
VVTLRDAGQV AVIDGDTYEV VSKVDSGYAV HITRMSATGR YAYVIGRDGK LAMIDLWTET
PAKVAEVQVC YDARSVEVSK YNGPEGDFTD KLAVVGCYWP PHFVILDGQT LEPIHIVSTR
GYTVDTMEYH PEPRVASIVA SDFKPEWIIN VKEIGQIWLV NYANPRAPQI KMLPAARFLH
DGGWDATHRY FLVAANQSNK VAVVDAQEGR MVALVDTPKI PHPGRGANWV DPEFGPVWSS
GHLGDPAIVS IGTDPEGHPN VAWKAVRVTP LPGAGSLFIK THPNSKWIWV DMTLNSDPAL
ARTICVIAKE NPAEPHTCWE ASSYGRAVHF EYNAAGTEVW VSIWGDASKP GETGEIVVYD
DATLTEKARI PNLVTPTGKF NVYNTVHDIY