Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3430 |
Symbol | |
ID | 5540929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4471569 |
End bp | 4473641 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895548 |
Product | hydroxylamine reductase |
Protein accession | YP_001433498 |
Protein GI | 156743369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.133713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000818462 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCCCAT GGAAACACAT CGTCTTTGGC GCCATGCTGG GACTGGTCGT GCTGGTTGCG TGTGCGCGCC AGGCGGAGGT GTCGCCGGCG ACGGCGCCCA CGCCAATCCC ACAGGCGGCA CCGGTGGTGG CCACGACTGC ACCGCCAGTC GATTGTGCGC TGGCGGCATT TCAGAAGGGA GGCTGCGGCG CGTGCCACGT CATCCCTGGC GTCCCCAATG CCAGAGGAAC TATCGGACCG GATCTCACCA ATGTCGCACA GGTTGCCGCT CAGACAATGC AGAGCAGCAC CTACACCGGC AACGCGACGA CGGTTGAAGC GTACCTCCGC GAAGCCATTC TCGAACCGGA TGTATTCGTC GCCCCCGATT GCAACGGCAG CCCATGCCAG AAGGGGGTCA TGCCGCCATC GCTGGGGCAG GGATTGTCCG AAGAAGAACT AGCGGCAGTC ATCGCCTACC TGCAAGCGCC ACCCGGCGCA GCGGAGGCAG TCGTCACCGA AGCGCCAACC GCTGCACCAT CGGAAGCCGC GCCGACCCTG AGCGACGACG AGTTCGCCTG GGCGAAACTC GTCTACTTCG AGCGCTGCGC CGGATGCCAT GGCACACTGC GCAAAGGCGC AACCGGTCCG GCGCTCACTC CCGACCGGAC CATTCCGCTT GGCACCGTCG GGTTGTCAAC GATTATCTAC AATGGTACAT CGCGCGGGAT GCCCGATTGG GGCAAGCAGG GCTTTTTCAC GAAGGAGCAG ATCGAAGTGC TGGCGCGTTT CTTGCAGCGC GAGCCGCCAG CGCCGCCCGA ATTGCCAATG GAACGCATGA AAGCATCGTG GAAGATGTAC GTCGCGCCGG ATCAACGACC AACTGCGCCA CAGACGAAGC GCAACTGGCA GAACTATTTC GTTGTGACGC TGCGTGACGC CGGCCAAGTG GCGGTGATCG ACGGCGATAC GTATGAGGTG GTCAGCAAAG TGGACAGCGG CTACGCGGTT CACATTACCC GCATGTCGGC AACCGGGCGC TACGCCTATG TCATCGGGCG CGACGGGAAA CTGGCGATGA TCGATCTGTG GACGGAAACA CCCGCAAAAG TCGCTGAAGT TCAGGTCTGC TACGACGCGC GTTCGGTCGA GGTCAGCAAG TACAATGGTC CAGAGGGCGA TTTCACCGAT AAACTGGCAG TGGTTGGCTG TTACTGGCCT CCGCACTTCG TCATTCTCGA TGGACAGACA CTGGAACCAA TCCATATCGT CAGCACCCGC GGCTACACCG TCGATACGAT GGAGTACCAT CCAGAACCAC GTGTCGCCAG TATCGTCGCT TCTGATTTCA AACCGGAATG GATCATCAAC GTCAAGGAAA TCGGGCAGAT CTGGCTGGTG AATTACGCCA ATCCGCGGGC GCCGCAGATT AAGATGCTGC CGGCGGCGCG CTTCCTCCAT GACGGCGGCT GGGATGCCAC CCATCGCTAC TTCCTGGTGG CAGCCAATCA GTCGAACAAG GTTGCGGTCG TCGATGCACA GGAGGGTCGG ATGGTTGCGC TGGTGGACAC GCCGAAAATT CCGCACCCCG GTCGCGGCGC CAACTGGGTC GATCCTGAGT TTGGTCCGGT CTGGAGTTCA GGGCACCTTG GCGATCCGGC GATTGTTTCA ATCGGCACAG ATCCCGAAGG ACATCCCAAC GTTGCCTGGA AAGCGGTGCG TGTCACACCG TTGCCCGGAG CAGGGAGCCT GTTCATCAAG ACGCACCCAA ACAGTAAGTG GATTTGGGTA GATATGACGC TCAACTCCGA TCCGGCGCTG GCGCGGACGA TCTGCGTCAT TGCGAAGGAG AATCCGGCAG AGCCGCATAC GTGCTGGGAA GCCAGTTCCT ATGGGCGCGC TGTCCACTTC GAGTACAACG CAGCCGGCAC GGAGGTGTGG GTAAGTATCT GGGGCGATGC GAGCAAACCG GGCGAAACGG GCGAAATCGT GGTCTACGAT GACGCCACGC TGACCGAAAA GGCGCGCATT CCCAACCTTG TGACGCCAAC CGGTAAGTTC AACGTGTACA ACACGGTGCA TGATATTTAC TGA
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Protein sequence | MRPWKHIVFG AMLGLVVLVA CARQAEVSPA TAPTPIPQAA PVVATTAPPV DCALAAFQKG GCGACHVIPG VPNARGTIGP DLTNVAQVAA QTMQSSTYTG NATTVEAYLR EAILEPDVFV APDCNGSPCQ KGVMPPSLGQ GLSEEELAAV IAYLQAPPGA AEAVVTEAPT AAPSEAAPTL SDDEFAWAKL VYFERCAGCH GTLRKGATGP ALTPDRTIPL GTVGLSTIIY NGTSRGMPDW GKQGFFTKEQ IEVLARFLQR EPPAPPELPM ERMKASWKMY VAPDQRPTAP QTKRNWQNYF VVTLRDAGQV AVIDGDTYEV VSKVDSGYAV HITRMSATGR YAYVIGRDGK LAMIDLWTET PAKVAEVQVC YDARSVEVSK YNGPEGDFTD KLAVVGCYWP PHFVILDGQT LEPIHIVSTR GYTVDTMEYH PEPRVASIVA SDFKPEWIIN VKEIGQIWLV NYANPRAPQI KMLPAARFLH DGGWDATHRY FLVAANQSNK VAVVDAQEGR MVALVDTPKI PHPGRGANWV DPEFGPVWSS GHLGDPAIVS IGTDPEGHPN VAWKAVRVTP LPGAGSLFIK THPNSKWIWV DMTLNSDPAL ARTICVIAKE NPAEPHTCWE ASSYGRAVHF EYNAAGTEVW VSIWGDASKP GETGEIVVYD DATLTEKARI PNLVTPTGKF NVYNTVHDIY
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