Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3428 |
Symbol | |
ID | 5540927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4467978 |
End bp | 4468406 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895546 |
Product | peptidylprolyl isomerase FKBP-type |
Protein accession | YP_001433496 |
Protein GI | 156743367 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0331608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00203796 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACGG CACAAACTGG CGACACCGTG ACAGTGCACT ACACCGGCAC ACTGGAAGAT GGCACCGTCT TCGACAGTTC GCACGGTCGT GAACCGCTGG TGTTTACGCT GGGCAGCGGG CAGGTCATCC AGGGATTCGA GGACGCAATC GTGGGCATGG AGGAAGGGGA GACACGCCGC GCTGTGCTGA CGCCAGACCA GGCGTATGGC GAGTACCATG ACGAATTGGT CTTCTCGCTG AGCCGCGACG AACTTCCACC GCAGATCGAT CCGGCAGTTG GCGAGCAGTA TCAGATGCGT CGTCCTGATG GACAGACGTT CATCGTCACA GTGCGCGACG TGTCGCCGTC CGATGTGACC TTCGACGCCA ATCATCCGCT GGCAGGCGCG ACATTGACGT TCGATATCGA ACTGGTGGCA ATTGAATAA
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Protein sequence | MATAQTGDTV TVHYTGTLED GTVFDSSHGR EPLVFTLGSG QVIQGFEDAI VGMEEGETRR AVLTPDQAYG EYHDELVFSL SRDELPPQID PAVGEQYQMR RPDGQTFIVT VRDVSPSDVT FDANHPLAGA TLTFDIELVA IE
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