Gene Rcas_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3425 
Symbol 
ID5540924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4465747 
End bp4465995 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content60% 
IMG OID640895543 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001433493 
Protein GI156743364 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00916142 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCGAG GAGTATCGAC GATGAACTGG ACGCTTCCTG TGATCAATCT CGACCGCTGC 
ACTGGCTGTG GTCAGTGTGT GCGGCACTGT CCAACCCAGG CGGTTGAACT GATCGAATGC
AGGGCCGTCA TCGTCCGCCC ATTCAACTGC ACCTATTGTG ATGCGTGCGA GCGTGCATGC
CCCACCGGCG CGATCGGACG CCCGTTCATC GTCGTTTTCG AGACCGGCCA GCGATGGAGG
CGCATATGA
 
Protein sequence
MQRGVSTMNW TLPVINLDRC TGCGQCVRHC PTQAVELIEC RAVIVRPFNC TYCDACERAC 
PTGAIGRPFI VVFETGQRWR RI