| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3424 |
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| Symbol | |
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| ID | 5540923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4464685 |
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| End bp | 4465611 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895542 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001433492 |
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| Protein GI | 156743363 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.110688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0105884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAAAG GCGTGCTTTA CGCGGCGGGC GCCTATGCCT GCTGGGGACT GTTGCCCGTT
TTTTGGAAGT TGTTGCAGCA TCTCGATGCG CTCGAAATTG TCGCGCACCG GATCATCTGG
GCATCGGCGT TCGCCGTGGT GCTGCTGACG GTCGGGCGGC GTTGGTCGCG GATCGGCGGC
GTCTGGCGCA ACCGGCGTGT GCTGGCGACC TTTCTAGTCA CCGGTGTGTT GCTGACGGCA
AACTGGTTTG TCTATATCTG GGGAGTGAAT ACCAATCACA TAGTCGAAAC GAGCCTGGGC
TATTTTATCA ACCCGCTGGT CAATGTACTG CTTGGCGCGC TGGTACTGCA CGAACGCTTG
CGTATCGGGC AGGGACTGGC AATGAGCGTG GCGCTGATCG GCGTGTTGTA CCTGACGTTT
CAGTATGGGA CGTTTCCCTG GATTGCGCTC ATTCTGGCAG GCACGTTCGC GCTCTATGGC
TTGCTGCGTA AAACAGCATC GCTCGACTCG CTCGAAGGGT TCTCGCTCGA AACGGCGCTG
CTCATTCCGC CGATGGTCGC GTTTCTGGCA TACCGTGAAC TGACCACACA CACCACGTTT
ATCCACGGCG ATCCACTGAC CTGGCTCCTT CTGATCGCCG CCGGTCCGAT CACCGCGATC
CCGCTCCTGC TCTTCGCTGC TGGTGCGCGG CGCGTCTCGC TGGTGACGCT GGGGGTATTG
CAGTATATCG CGCCCACATT GCAGTTCCTG ATCGGCGTGG GTCTGTATGG CGAACCGCTG
ACATTGCCGC GTCTGATCGG GTTTGTGCTG ATCTGGGCGG CGCTGGCGAT CTATACATTC
GATGGCATAA TGCACTGGTG GACCATCACT GCGCCATCAC CTGCGGCGCC AGAGGCGGCG
GAGAGCATCG AACATGCGCT CAACTGA
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| Protein sequence | MNKGVLYAAG AYACWGLLPV FWKLLQHLDA LEIVAHRIIW ASAFAVVLLT VGRRWSRIGG
VWRNRRVLAT FLVTGVLLTA NWFVYIWGVN TNHIVETSLG YFINPLVNVL LGALVLHERL
RIGQGLAMSV ALIGVLYLTF QYGTFPWIAL ILAGTFALYG LLRKTASLDS LEGFSLETAL
LIPPMVAFLA YRELTTHTTF IHGDPLTWLL LIAAGPITAI PLLLFAAGAR RVSLVTLGVL
QYIAPTLQFL IGVGLYGEPL TLPRLIGFVL IWAALAIYTF DGIMHWWTIT APSPAAPEAA
ESIEHALN
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