| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3423 |
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| Symbol | |
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| ID | 5540922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4462226 |
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| End bp | 4464523 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895541 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001433491 |
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| Protein GI | 156743362 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.353109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0193159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTA CGCAGCTGCC GCTCGTCGGC GATGTCCTGG AGCAACCGAT CAATGAGGCG
GAGCAACGCA GCGAGGTGCT GGCGAACCTG CTGGATGTTT CGACGTACCT CGTGTCGGTG
CTGAATCCAA ACGAATTGTT CACCGGATTG GTTCGGCGCG TAGTTGAGGT TGTTCCTGCT
GTGCAGGCTG GTCTGCTCTG GATCTATGAC CAACGCCAGA CGACCCTGCA CCTGGAGTCG
TTCTATGGTC TCGATGTCGG TCCGGCGTAT GAAGCGATCG GTCGTTTGCG CCTGCGCCCC
GGTGAGGGGC TGGCAGGGGA AGCATTGCGA CGTGGTGAGC CGCTCCTGAT CGAGACCCGC
TCGTCGTACC GCGATCTGGC GCGGCGGGTC AGCCCACGCA GCGAACCGGA TGTGTGCGCC
TTCCTTGAGT GTCTTCCCCG CGAATTAACG GCTGTCGTCC TGCCGCTGCG CATTGGTGCA
GAGGTGATTG GCGTCCTGGA ATTGATGAAT CTTGGCAATC GACCGCAACT GCGTCGCACC
GATCTTCAGG TGTTGCAGAC GTTCAGCAAC CTGGCAGCCG GCGCTATCAA GAACGCGCAA
CTCCACGCGC AAATGAAGGC GCATCAGCGT CGTTTGGAGG CGTTCGGTGC AATTGGGACG
GTGATCAGTA CCGCAGCCGA TCTTGATGAA TTGCTGCGCA ACGTGCTCGA TGTCGTGCTT
GGCGTGGTGG ATGCGTCAGT CGGCATCCTG CTGCTGCTCG ATCCCGGTCG CGCAATGCTG
CAACTCGGCG CATGGCGCAA TATCCCGCAT CAGTTTGTTG AACAGCATCG TGAAATTCAC
GTTGTCGGCG CGATGTGCGA GGAAGCGGTG CGCTACGGTC AACCGATCCG CCGTCCGTTG
ATCGCCGGGT CGGGCGAGGA TACCTTGATC GACGACGGAT TGGCGAGTTG CGCCTATATC
CCCCTCCTGG CTGGCGGAAC GGTGGTGGGT GTGATTGGCA TCTATGGCGA CCCTGCGCTG
CCGGAACGCA TCGATGTGCA GACGCTGATG ATGATGAGCA ACCTGATTGG CTTTGCAATC
GCCAACGTGC GACTGTATCA GGAAAGCCAT ATCGAACGCC GGAAACTGAC AGCCGTGATC
AACAGTATTG TCGAGGGAGT GGTGCTGTGC GATCGTCTTG GGCGGTTGGT GCTCGCCAAT
CGCATGGCAA TGGAACTCTT GTCGTCCGAC ACGTTTCCCT ACCAGCAACC GATCAGTTCG
ATGGCGGATT TCTATGCCAT TCGTGATCTC GACGGTCGCG CGTTGCCGAT CGAGCGCCTG
CCGCTGACGC GCGCCCTGGC GGGTGAGGTG TTTCACGATT ATCGGGTGCT GTTGCGCGGC
GCCAGCGGCG AAGATACGGT GATGAGTTTC AGTGGTGCGC CGGTCTACGG CGATATGAAT
ACTATCGAGG GCGCCGTCGT CATCTTCCGT GATATCACTG AGCATCAGAA ACTGGAGCGC
GCCAAAGACG ACTTTCTTGC GGTTGCGGCG CACGAATTGC GCAGCCCGCT GGCTGCCGTG
CGCAGTTATG CCGATCTCCT CATCCGCCGC GAGCAGCGCC GCGACCGCGA TAAGGACGCC
CCCTCGGATT TGCGCGGTCT GACCATCCTT TCGCAGCAGG TCAGCCATAT GCTGCGCCTG
GTGGATAACC TGCTCGATAT GTCGCGCCTC GATGCCGGTC TCTTCAGCCT GCAACTCCAG
CGCGTCAATC TGGTTGCCCT GACTCACCAG GTGATCGATC AGTTGCGCCC GACAATTGGC
GAACGCGACG TCACGTTGAC GAGTGATGCG CCTGATCTGC TGGTGACGTG CGATCCGCTG
CGCATCCGTC AGGTGCTGAC GAATCTGCTG GTCAATGCTG CACGCTACAG TAGTCCCGCT
TCCCCAATTG AAGTCACGGA GATCGTTATT CGATCCGAGG TGCTGGCAAC ACGGTATGCC
CACCAACCAC CGCCGACCTT GCGATCATGG TTGATCGACA TTCAGCGTAC ATCGCAACCG
TTGGCGCTGA TTACCGTGCG CGATTATGGC ATTGGTATGT CGGAAGAGAC GATGCAGCGT
CTGTTCCGGC GGTATGCACG CGGTCGTCAA CGCGTGGGCG AAGGGCTTGG GCTGGGATTG
TATCTCAGTT ACGAACTGAT TGGGCGTCAT GGCGGAACGA TCTGGGCGGA GAGTGTCGAA
GGGCGCGGCA GCACCTTCTA TGTGACATTT CCTCTAGAGG GTCCGCCTCT GTCGCATGGG
TCTGTGCAGC AGGCGTAA
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| Protein sequence | MTITQLPLVG DVLEQPINEA EQRSEVLANL LDVSTYLVSV LNPNELFTGL VRRVVEVVPA
VQAGLLWIYD QRQTTLHLES FYGLDVGPAY EAIGRLRLRP GEGLAGEALR RGEPLLIETR
SSYRDLARRV SPRSEPDVCA FLECLPRELT AVVLPLRIGA EVIGVLELMN LGNRPQLRRT
DLQVLQTFSN LAAGAIKNAQ LHAQMKAHQR RLEAFGAIGT VISTAADLDE LLRNVLDVVL
GVVDASVGIL LLLDPGRAML QLGAWRNIPH QFVEQHREIH VVGAMCEEAV RYGQPIRRPL
IAGSGEDTLI DDGLASCAYI PLLAGGTVVG VIGIYGDPAL PERIDVQTLM MMSNLIGFAI
ANVRLYQESH IERRKLTAVI NSIVEGVVLC DRLGRLVLAN RMAMELLSSD TFPYQQPISS
MADFYAIRDL DGRALPIERL PLTRALAGEV FHDYRVLLRG ASGEDTVMSF SGAPVYGDMN
TIEGAVVIFR DITEHQKLER AKDDFLAVAA HELRSPLAAV RSYADLLIRR EQRRDRDKDA
PSDLRGLTIL SQQVSHMLRL VDNLLDMSRL DAGLFSLQLQ RVNLVALTHQ VIDQLRPTIG
ERDVTLTSDA PDLLVTCDPL RIRQVLTNLL VNAARYSSPA SPIEVTEIVI RSEVLATRYA
HQPPPTLRSW LIDIQRTSQP LALITVRDYG IGMSEETMQR LFRRYARGRQ RVGEGLGLGL
YLSYELIGRH GGTIWAESVE GRGSTFYVTF PLEGPPLSHG SVQQA
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