| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3420 |
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| Symbol | |
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| ID | 5540919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4457044 |
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| End bp | 4459203 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895538 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001433488 |
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| Protein GI | 156743359 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.688425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.99318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGC AGACTCCAAC AAGTGCAACC CGTGAGGACG TTGAGCAATC CTCTGTCCTC
GATCCGCGTT TGGATGGTCT AATGCGCATC GCACAGGCGG CTGAGACTGC GGCGACGCTG
GAGCAGTTGC TGTACCGTTC GCTGATTGAA CTGAACCGCT TGTTCCAGTC GGATCGCGCA
TTTGTGTTGT TGGTGGATGC TTCCGGTCGG ATGACGCTTG CGTGTGAACA TCCATCGCCG
GGTGACGCGC CTGCCCTGAC GCTCGATAGT CTGGCAGGCG CGATTGATGT CATACGGATG
CGGCGTCCGG TTGTCATCGA GACGGAAAAG GCGCGGGAAG GGTGGGATAT TGCACTGCTC
CGGGCGCGCG GCGTGCAGAC GATGATCGTC ACCCCGCTTA TTGCGTGTGA TGAAGCCCTT
GGGGTTCTGG CGGTGTGCAG CGCCAACGCT GCGCGGGTGT TCGGGTCGGA GGAGGTGGCG
TTCATCAGAA CGCTGAGCGG CCAGATGGCG CTGGCGATCG CATCGTTTCG CAGCCGTGAC
GCTGCCGAGC GGCGCACCCA AGAACTCAAA ACGCTCAACG AGATTGCGGC GACGGTCACC
TCAACCCTGG ATACGCACGA AGTATACCGC CTGGTGGTTC AGCAACTCAG TGATTACTTT
CACGTCGAAG CCGGTTCGCT GTTGCTCCTT GATGAGTCAA CCGGCGATCT TGAGTTTGTT
ATGACCATCG AAGGCGGCGA GGAGAAGCTG GCCGGCATCC GGGTGCCGGC TGGACAGGGC
GTCGTCGGGC ATGTAGTGCG CACCGGTCGG TGGGAAATCG TGCACGATGT CACCCGCGAT
CCGCGATTTT ATTCCAAAAT CAGCGAAACG ACCGGTTTCC CGACGCGCTC GATCCTCTGT
GTGCCGATGA TTGCCAGGGG GCGTGTGATC GGGGCGATTG AACTGCTCAA CAAAATCGGC
GGTGATTTCG ATGAGGAGGA AGCACAGCGA TTGATGCGCA TGGCCGCATT TATTGCGGTT
GCTATCGAAA ATGCGCGCCT CTTCCAGCAG ATCGCTGCCG GACGCGATCG CATGGCATCC
ATTCTGAACT CAACAGCCGA TGGCATTCTG ATGGCGGATA TGCGGGGTGA CATTCAGCTT
GCCAATCCGC TGGCAGCGCG GATATGCGCA TGTACAGAAG AGGCCTTGAT CGGACGACGG
ATCGATGATG TGGTGACTGA GTTGCAGGCA CGCGCTCACG AAGTCTCGGC GCCTGCGTGG
GGTCAGGATG CGTCGGCGCC GGTGCAGATC AGGGATCTGG CGCTGACCGA TGGAATGCAC
CGCTATGTGC GCCTGTTGCG GCTCCCCGTC TATGATGCGC ACAATGAACC CCACGGCGAG
TTGCTCATCC TGCGTGACAT TACCCAGGAA CGCGAACTGG AGCAGTTGCG CGAAGATTAC
ACCAGCATGC TGGTGCACGA CCTGCGCGCG CCGTTGACAT CGATCATGAA CGGCATCATG
ATGCTCCAGC GCGGTATCGT TGGTCCGGTG AACGAGCAAC AGCAGGAGTT GCTGAAGATT
GCGTATCAGG GCAGCCAGAC GATGCTGCAC CTGATCAACA CCCTGCTCGA CATCTCAAAG
TTGGAGCAGG GTCAGATGAC GCTCGATCTC AAGCCACTGC CCATTTTCAG TGTGATCGAT
CAGGCAATTG AACGCCTTCA CAACCTGGCG AGCAGTCGCC ATGTCACTAT TGAGCAGCGC
CTGGCGCCGT ACCTTCCGCC GGTTGAGATC GATGGCGAAA AGATCGTTCG GGTACTCCAG
AATCTGCTGG ATAATGCAAT CAAGTTCTCG CCGCCGCAGA GTGTGGTGAC GATTGGGGCG
TTTCTGGCCG GCAGCACGTC TCCCCTTCCA GAAGATGCTC CTGTGCATCT TTCGATTGAG
GGTGAGGATT ATCTGGTAGT ATGGGTGCAG GATCGCGGTC CGGGCATACC GCCAGCCTAT
TTTCAACGCA TCTTCGAGAA GTTTGGTCAG GTGCGCGGGC GAAAGGTGCG CGGGACCGGT
CTGGGGTTGA CGTTCTGCCG CCTGGCTGTC GAGGCGCACG GCGGGCGTAT CTGGGTCGAA
AGCGTCGAGG GGTCGGGGAG CGTCTTTGCG TTTACCCTGC CGGTGAGACG TGATAGTTGA
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| Protein sequence | MRPQTPTSAT REDVEQSSVL DPRLDGLMRI AQAAETAATL EQLLYRSLIE LNRLFQSDRA
FVLLVDASGR MTLACEHPSP GDAPALTLDS LAGAIDVIRM RRPVVIETEK AREGWDIALL
RARGVQTMIV TPLIACDEAL GVLAVCSANA ARVFGSEEVA FIRTLSGQMA LAIASFRSRD
AAERRTQELK TLNEIAATVT STLDTHEVYR LVVQQLSDYF HVEAGSLLLL DESTGDLEFV
MTIEGGEEKL AGIRVPAGQG VVGHVVRTGR WEIVHDVTRD PRFYSKISET TGFPTRSILC
VPMIARGRVI GAIELLNKIG GDFDEEEAQR LMRMAAFIAV AIENARLFQQ IAAGRDRMAS
ILNSTADGIL MADMRGDIQL ANPLAARICA CTEEALIGRR IDDVVTELQA RAHEVSAPAW
GQDASAPVQI RDLALTDGMH RYVRLLRLPV YDAHNEPHGE LLILRDITQE RELEQLREDY
TSMLVHDLRA PLTSIMNGIM MLQRGIVGPV NEQQQELLKI AYQGSQTMLH LINTLLDISK
LEQGQMTLDL KPLPIFSVID QAIERLHNLA SSRHVTIEQR LAPYLPPVEI DGEKIVRVLQ
NLLDNAIKFS PPQSVVTIGA FLAGSTSPLP EDAPVHLSIE GEDYLVVWVQ DRGPGIPPAY
FQRIFEKFGQ VRGRKVRGTG LGLTFCRLAV EAHGGRIWVE SVEGSGSVFA FTLPVRRDS
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