| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3414 |
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| Symbol | |
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| ID | 5540913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4444784 |
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| End bp | 4445893 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895532 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001433482 |
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| Protein GI | 156743353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0388714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG CTGTCCGTGC AACTGCTTTC GCCAAAACGC TGCGTGCTAT CTTCCTCGGC
ATTGCGCTGC TCGCATTGAG TGTTGCGTGT GCCGGCTATC TCCTGCTGAG CGAAATACGA
CGCCCGGCAG GAACCGATGC TGCGCCGGTC GAGTTTATCG TTGAACCCGG CGATAGCGCC
AGCGTTATTG CCACCCGTCT CGGCGCAGCG AATCTGGTGC GCCAACCGTT GCTCTTTACC
ATCCTGGTGC GCCTCCGGGG TCTCGACGGC GAATTGCAGG CCGGTCGCTA CCTGCTGCGC
GCCAATATGA CGATGAGCGA AATTATTGCC GCGCTCCAGA ACAGTCGTGT CGAGGAAGTG
CAGGTGACCA TCATCGAAGG GTCGCGACTC GAAGAAATCG CCGAGCAACT TGCCACAGCC
GGACTGATCA ATGTCACGGA ACAGGCATTC TTGCGCACCG CGCGAAACGG GGCGGCGTTT
CAACCGCAAC ACTTCTATCT CAATAGCCTG CCACCCGGCG CCAGCCTGGA AGGGTATCTG
TTTCCCGATA CCTATCGCTT CGCGGTGACG GCCACCGTTA CCGAAGTGAT CGAAATCATG
CTCGACCGTT TCGATGAGCA GTATGCCACA TTCGAGCGCG ATGTCACGGC GCCGCGCGTG
AGTGTGCACG AAATTGTGAC GATGGCGTCA ATCGTCCAGC GCGAAGCAGC GCGTGAGGAC
GAAATGCCCA AGATCGCTGC CGTCTTCTGG AATCGCCTCA AACCCGAAAA CCTCGCCGAA
ACCGGCGGCG GCAAATTGGG CGCCGATCCG ACCATCCAGT ACATTCTGGG ACAACGCGGC
AACTGGTGGC CCCGACTCGA CTCGTTGAGC AGTGATGAGA TCAATGGGAT CGCCAGCCCG
TATAACACGC GCGTCAATCC GGGTTTGCCC CCCGGACCGA TTGCCAGCCC CGGTCTTGCA
GCGCTCCGCG CCGCTGCCCG TCCAGACGAG TCGGCGCCCT ATCTCTACTT TGTTGCATCG
TGCACAAACC CTGGCGCGCA CAATTTTGCC GTCACCTTCG AGGAGTTTCA GCGCTTCGAG
CGGGAGTATC TGACATGTCC ATCGCGTTAA
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| Protein sequence | MADAVRATAF AKTLRAIFLG IALLALSVAC AGYLLLSEIR RPAGTDAAPV EFIVEPGDSA
SVIATRLGAA NLVRQPLLFT ILVRLRGLDG ELQAGRYLLR ANMTMSEIIA ALQNSRVEEV
QVTIIEGSRL EEIAEQLATA GLINVTEQAF LRTARNGAAF QPQHFYLNSL PPGASLEGYL
FPDTYRFAVT ATVTEVIEIM LDRFDEQYAT FERDVTAPRV SVHEIVTMAS IVQREAARED
EMPKIAAVFW NRLKPENLAE TGGGKLGADP TIQYILGQRG NWWPRLDSLS SDEINGIASP
YNTRVNPGLP PGPIASPGLA ALRAAARPDE SAPYLYFVAS CTNPGAHNFA VTFEEFQRFE
REYLTCPSR
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