| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3411 |
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| Symbol | |
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| ID | 5540910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4441150 |
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| End bp | 4442316 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895529 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001433479 |
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| Protein GI | 156743350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.193899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGTT TTCTGGATGG CGAGGATCTC TCGCCCAACG CTATCGAGCG CGCTCGACAG
GCAAGCGGCG AGTACATCGA TCTGACGAGC AGCAATCCGA CGCATCAGGG GCTGTTGTTT
CCAGACGATG TTCTGCGTGA GGCGTCTGCC GCGTATTGGG CGAACCGCCG GTACGATCCG
GACCCCCGCG GACTGTATGC GGCGCGTTTG GCGATTGCGC AGTACTACGC CGAACGCGCG
CCGGCGCTAT CGCTGCACGC CGATCAGATT GTCATAACGG CAAGCACCAG CGAGGCATAC
AGTTTGCTGT TTGCATTGCT GACCGATCCG GGCGATAATG TGCTGGCGCC GGCAATTACG
TACCCGCTCT TCGAGTATCT GGCGATGGCG CATCAGATCG AACTGCGCCC ATATGCGCTG
GATGAACGGC GGGGCTGGCG CATCGATCCG ACGAGCCTTC GTCTTCAGGC GGATGAGCGC
ACCCGCGCCG TGCTGGTCGT GTCGCCGCAT AACCCGACCG GCGCCGTGCT TGCGTCGCGC
GCGCCGGTGC TGCACGCCCT TGATCTTCCT ATTATTTGCG ATGAGGTGTT CGCCGCATTC
CCGTATCGCG CCGCTACCGT GCCGCCGGTT GGCGCGCTCT ACCCGGAATT GCCGGTCTTC
CACCTGAACG GCATCTCGAA GATGTTTGCG CTGCCTGATC TGAAACTCGG CTGGATCGCA
CTGAACGATG CGGCGCACGA CCGGTTTGGC GAACGTCTCG AAGTGCTCAA CGACACCTTT
CTCAGCGCCA ATGCCCTGAC ACAGACCATG CTGCCGGCTA TCTTTGAGCA TGGTCGCGCA
TTCACCGCCG CCATGCACGA GCGCATCCGC CAATCGCTGG ACATGGCAAT CGCGCTCTTG
TCCGGTTGCG ATGTGGTGCG CGTGCATCCG CCGGATGGCG GGTATTATCT GTTTCCCGAA
ATCGTCGGAT GGGGCGATGA AGAGGCGCTG ATTCTCTATC TGCTCAAGCA TGGTGTGCTG
GTGCATCCGG GATACTTCTA TGGCTATGAG CAGGGAGCGC ACGTCGTTGT CTCGTGTCTG
GTCGCCCCTT CGCAGTTGCG CGAGGGGATC GAACGCATGG TTGCGGCGCT TTCCGCATGG
GTTTCAGCGC GCGACTCCTC ATCATAG
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| Protein sequence | MPGFLDGEDL SPNAIERARQ ASGEYIDLTS SNPTHQGLLF PDDVLREASA AYWANRRYDP
DPRGLYAARL AIAQYYAERA PALSLHADQI VITASTSEAY SLLFALLTDP GDNVLAPAIT
YPLFEYLAMA HQIELRPYAL DERRGWRIDP TSLRLQADER TRAVLVVSPH NPTGAVLASR
APVLHALDLP IICDEVFAAF PYRAATVPPV GALYPELPVF HLNGISKMFA LPDLKLGWIA
LNDAAHDRFG ERLEVLNDTF LSANALTQTM LPAIFEHGRA FTAAMHERIR QSLDMAIALL
SGCDVVRVHP PDGGYYLFPE IVGWGDEEAL ILYLLKHGVL VHPGYFYGYE QGAHVVVSCL
VAPSQLREGI ERMVAALSAW VSARDSSS
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