| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3388 |
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| Symbol | |
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| ID | 5540887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4416613 |
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| End bp | 4417785 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895506 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001433456 |
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| Protein GI | 156743327 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGA TCGATCTCGT TATTCTCGTC GTCAAGTGCA TCGTCCTGTC GCTGGCGGCG
ACAACCATTT TCGCTTACTT CACGCTGTTC GAGCGGCGCA CGCTGGCGCG CCTGCAAAAT
CGGGTCGGGC CAAATCGCGC CGGACCGGGA GGGTTTCTGC AACCGCTCGC CGATGCGGTT
AAACTGTTCT TTAAGGAGGA TGTGACGCCG TTGCTGGCGG ATCGCTGGGT TTATCTGGTG
TCGCCAGCGT TTGCGCTTAT TCCTGCGATT ATCATCTGGG CGACCATTCC GGTTGGCATG
TGGCCCGATG GGGAGGGCGA CAACTGGTTG CAACTCGCCG AGATTAATGT TGGTGTTCTC
TACCTGCTGG CAGTGACGTC GGTCGGCGTA TATGGCATTG CTATTGCGGG ATGGGCGTCG
AACAACAAAT ATTCGATGCT TGGCGGCATT CGCGCATCGG CGCAGGTCAT CTCCTATGAA
CTTGCGCTGG GATTGACCGT TTTGGGTGCG GTGATGCAGG CGCAAAGTTT CAGCACCGCC
GAGATCGTCG AGCGGCAAAC ACAGATGTGG AACATTGTGC CGCAGTTTCT GGGGTTTGTC
GTGTTCATCA TCGCCGCCAC CGCTGAAGTG GTGCGCGCGC CGTTCGACCT GGTCGAAGCC
GAGCAGGAAC TCGTCGGTGG GTACAACACC GAGTACAGTT CGATGAAATT CGCGCTGTTC
TTTATGTCGG AGTATGTCAA ACTGGTGGCG ATGAATGCGA TTGCCGTGAC GCTCTTTCTG
GGAGGCTGGC ATTTCCCCGG CTTGCAGACG TTGACGCAGG CGGTGACGCA ACAGTATGGC
GCTGCCGTCG GCAATGCCGT GCTCGGATTG ACGTCGCTCG GCGCATTCTT GCTCAAAGTG
TTGTTGCTGT CGTTCGTTTC GGTCTGGATC CGCGCCACGT TGCCGCGGGT GCGCTACGAT
CAGTTGATGA ACCTGGGCTG GAAGGTGTTG CTGCCCCTTG CGCTCATCAA TGTCGCTATC
ACTGCTGTGC TGAACGTTCT GCTGCCGGAT GCCCCTGTCC TCACCGCTAT CATTGGTCTG
GTCGCCGGTA TCATGATTCT GGCAGTTGCG GCAATCGTCG GCAGACCGGG GAAGGAAAAG
CGCACGGTGA AACTGGTGGA GATCAGCGCC TGA
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| Protein sequence | MTWIDLVILV VKCIVLSLAA TTIFAYFTLF ERRTLARLQN RVGPNRAGPG GFLQPLADAV
KLFFKEDVTP LLADRWVYLV SPAFALIPAI IIWATIPVGM WPDGEGDNWL QLAEINVGVL
YLLAVTSVGV YGIAIAGWAS NNKYSMLGGI RASAQVISYE LALGLTVLGA VMQAQSFSTA
EIVERQTQMW NIVPQFLGFV VFIIAATAEV VRAPFDLVEA EQELVGGYNT EYSSMKFALF
FMSEYVKLVA MNAIAVTLFL GGWHFPGLQT LTQAVTQQYG AAVGNAVLGL TSLGAFLLKV
LLLSFVSVWI RATLPRVRYD QLMNLGWKVL LPLALINVAI TAVLNVLLPD APVLTAIIGL
VAGIMILAVA AIVGRPGKEK RTVKLVEISA
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